Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0153 ATGGCTGGGTTCTTCTCTCTAGGCCCACAGAACAAACAAGAAGAAGAAAAAGAAGATAACAACAACAGTAACAGCCTATTCTTGTTCAGGAACGAGGAGATCTACAACAAAGGATTCGAGATATGGCCGCAGTCTTATCATCAGCCGCATCACAACTTGAACAACTACTACTCGTTCGGGGCGGGTCCTAGTCGCAGAAACTCCTCAAACGACGACGTCGTCTCTGACGACTCTACGAGGTTCGGATTCACGGTCATGAGGTCTGGAGGTCTAGGAGGTGGCATGAACTGTCAAGATTGCGGGAACCAGGCTAAGAAGGACTGTGCACATCTCAGATGCAGGACTTGCTGTAAGAGCCGAGGGTTTCAGTGCCACACCCACGTCAAGAGCACTTGGGTTCCCGCAGCTAAACGCCGTGAACGACAGCAACAACTCGCTGCGTTGCAGCAGCAGCAGCAGCAAGACCAACAATTTAGAGGAGATAATTCGAAACGACACAGAGAAAATCAAGCTTCCGGCTCTCTTGCCTGCGCTCCATTAATGCCAATTGCCACAACAGGGTTGGAACTGGGACAATTCCCACAGGAGGTGAACTCTTCGGCTGTGTTTCGCTGCGTGAGAGTAAGCGCAATGGACAGTCCAGAGGACCAGTACGCGTATCAAACGGCTGTGAACATCGGAGGTCACCTTTTCAAGGGAATTCTGTATGACCAAGGCCCTGAAGGTGCTTACACCACCGGTGGCGAGAGCTCCTCCGGTGGAGCTGAAGCTCAACAATTAAATCTCATAACCGCGTCGACCCCCACGAATGCGGCAACAACCAGCAGCGCTAACCCATTTGATCCATCTTCACTATACCCGGCTCCGCTCAATGCCTTCATGGCTGGTACGCAATTCTTCCCACCCCCGAGGTCCTAA 918 0.5185 MAGFFSLGPQNKQEEEKEDNNNSNSLFLFRNEEIYNKGFEIWPQSYHQPHHNLNNYYSFGAGPSRRNSSNDDVVSDDSTRFGFTVMRSGGLGGGMNCQDCGNQAKKDCAHLRCRTCCKSRGFQCHTHVKSTWVPAAKRRERQQQLAALQQQQQQDQQFRGDNSKRHRENQASGSLACAPLMPIATTGLELGQFPQEVNSSAVFRCVRVSAMDSPEDQYAYQTAVNIGGHLFKGILYDQGPEGAYTTGGESSSGGAEAQQLNLITASTPTNAATTSSANPFDPSSLYPAPLNAFMAGTQFFPPPRS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0153 305 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 291 IPR007818 GO:0003700|GO:0006355
Prci2g0153 305 Pfam Domain of unknown function (DUF702) 94 241 - -
Prci2g0153 305 MobiDBLite consensus disorder prediction 1 23 - -
Prci2g0153 305 NCBIfam LRP1 C-terminal domain 192 240 IPR006511 -
Prci2g0153 305 MobiDBLite consensus disorder prediction 149 172 - -
Prci2g0153 305 NCBIfam putative zinc finger domain, LRP1 type 96 138 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0153 Prci-Chr2 1234690 1237084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0153 1 305 C2H2 Transcription Factor Family AT1G75520 47.887 2.25e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Prci2g0153 DUF702 2.7e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0153 - - gmx:100807290 404.06