Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0127 ATGGAAGGTAATCAAGGTATCGACCCAGCCAGTACTGGTACTGATACTGGTATGCAACTAATCGGTTCCGCAATTTTTTCCTCTCCTGGAGCAACTCTGAGGCCACAAAACCGATTCAATGCTCCCAGCCCCAATTTCAATGCCTCTCAAATGGGCGCGTCTGCGCTTCTGATGCAACAAAATTTTAGTCCTGAGAATCTGAAACCCGGCATACCTCCATCCCACCCAAATATCCCATCTTCGTCACACTATCCCCCAATTTCAGAGTTCCAATCGGCTTCCCAGCAATTGCGTTCTCCGAATATGAGACCTCGTTCTTCCCATTCAAGGTCTTTGTCCCAACACTCATTTTTTTCCCCGGATTGCTTGCCTCCATTGAGTCCTTCACTTTATTGTGAGCCCTCGGCGACCCCTCTTTCTAACTCGATTTCCCCAGACGTGTCCATGGAAGAAAGTGTGGTTAACTCTCATGGCCCTGGCATTTCTATGCCCGTCAATAGGGATCATGCCTTTCAAGCTGGTCCTAGTGTTCTTCCTCGTAAAGGGCACAGGCGCTCCAGCAGTGATACTCCATTAGGAATCTCTGGCTTCGCTCAATCTTCTCCTCAGCTGGTTGTCTCTCCTACTTGGATGAATCTGGAGAATTCAATTTCTAGAGGAGAAAACTCAGGATTGGAGAAGCCAATTCAATTGGTAAAAAAGGAGCTAAAAAAGGATGAGGGTCATGTTGATAGTTACAATGCAAAACCTATGGTTGAGAGGAAAGAGGATGTGATGGATGATTTAATTAGCGTGTATATGAATTTGGACAATATTGATAATGTGAACTTATCTGGTGCGGAAGAATCAAAGACTTTTGAAAGCAGTGATAATGAAGTTGAGAGTCTTGTAAGTGGAAAAACTACCTCCACACAAGGGGCAACTTCGAGCTTTGTGGAGGAAAGGAGGGAAGGAATCAAGAGGAGTTCTAATGGGGACATTGCACCAGGCTCCCGTCATCGGAGAAGTTTTTCCTTGGATAGTTCTATAGGAAATTTGCATATTGGAGATGATTCACCAAAGCTTCCTCCTTTGGGGAATGGAGTTTGTCAGCGCTCACCTAGCAATTCAGCAGATGGTAAAACATTTGAGATCAACATGGAGTTGAGAAATGGTGAATTCACTGAACTGGAGCTAAAAAAAATAATGGAAAGTGATAAACTTGCTGAGATTGCTTCGTCAGATCCCAAACGTGCAAAAAGAATATTAGCTAATCGTCAATCGGCTGCTCGATCCAAGGAGCGAAAGGTGCAGTACATTGCTGAACTAGAGCACAAGGTGCAAACTCTTCAGTCAGAGACAACCACAATGTCTACTCAATTTACCACACTACAGAGGGATAACTCACATCTTAAAAGTGAGAACAGTGAGTTGAAATTCAGGCTTCAAGCCATGGAACAGCAGTCCCAACTGAAGGATGCTCTGAATGAGACCTTGACTGCTGAAGTCCAGCGTTTGAGGCTTGCAGTCACAGAACTTGGTGGCGAGCCTATTCTCTCGGGCTGCATAGCAGCTCGCCAACATGCTATTAATCAACAAAGGTTCCAATTGCAGCATGAGCAGCCTGGCCAGCTTAAACGATCGCAAATGCAACATCAGCCTCAGGAGGAGACCCAGCCTCAGTCGCACCAGATTCAACATAATGAATTGAATCTCCAGCCTCAAAATGACAAAGCTACTGCCTTCTGA 1728 0.452 MEGNQGIDPASTGTDTGMQLIGSAIFSSPGATLRPQNRFNAPSPNFNASQMGASALLMQQNFSPENLKPGIPPSHPNIPSSSHYPPISEFQSASQQLRSPNMRPRSSHSRSLSQHSFFSPDCLPPLSPSLYCEPSATPLSNSISPDVSMEESVVNSHGPGISMPVNRDHAFQAGPSVLPRKGHRRSSSDTPLGISGFAQSSPQLVVSPTWMNLENSISRGENSGLEKPIQLVKKELKKDEGHVDSYNAKPMVERKEDVMDDLISVYMNLDNIDNVNLSGAEESKTFESSDNEVESLVSGKTTSTQGATSSFVEERREGIKRSSNGDIAPGSRHRRSFSLDSSIGNLHIGDDSPKLPPLGNGVCQRSPSNSADGKTFEINMELRNGEFTELELKKIMESDKLAEIASSDPKRAKRILANRQSAARSKERKVQYIAELEHKVQTLQSETTTMSTQFTTLQRDNSHLKSENSELKFRLQAMEQQSQLKDALNETLTAEVQRLRLAVTELGGEPILSGCIAARQHAINQQRFQLQHEQPGQLKRSQMQHQPQEETQPQSHQIQHNELNLQPQNDKATAF 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0127 575 Pfam bZIP transcription factor 410 468 IPR004827 GO:0003700|GO:0006355
Prci2g0127 575 MobiDBLite consensus disorder prediction 176 196 - -
Prci2g0127 575 MobiDBLite consensus disorder prediction 1 118 - -
Prci2g0127 575 Gene3D - 410 463 - -
Prci2g0127 575 FunFam probable transcription factor PosF21 409 462 - -
Prci2g0127 575 SMART brlzneu 406 470 IPR004827 GO:0003700|GO:0006355
Prci2g0127 575 MobiDBLite consensus disorder prediction 283 335 - -
Prci2g0127 575 Coils Coil 426 446 - -
Prci2g0127 575 MobiDBLite consensus disorder prediction 81 118 - -
Prci2g0127 575 Coils Coil 461 481 - -
Prci2g0127 575 CDD bZIP_plant_RF2 411 461 IPR044759 GO:0003700|GO:0006355
Prci2g0127 575 MobiDBLite consensus disorder prediction 283 311 - -
Prci2g0127 575 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 92 561 - -
Prci2g0127 575 MobiDBLite consensus disorder prediction 528 575 - -
Prci2g0127 575 SUPERFAMILY Leucine zipper domain 410 466 IPR046347 GO:0003700|GO:0006355
Prci2g0127 575 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 408 471 IPR004827 GO:0003700|GO:0006355
Prci2g0127 575 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0127 Prci-Chr2 1014259 1018763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0127 44 529 bZIP Transcription Factor Family AT4G38900 44.961 1.61e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci2g0127 bZIP_1 4.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0127 - - pcin:129302979 1094.72