Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0126 ATGAATAGTTTCAAATATAGACCTTGTAAGTCCATGGAAGGTAATCAAGGTATCGACCCAGCCAGTACTGGTACTGATACTGGTATGCAACTAATCGGTTCCGCAATTTTTTCCTCTCCTGGAGCAACTCTGAGGCCACAAAACCGATTCAATGCTCCCAGCCCCAATTTCAATGCCTCTCAAATGGGCGCGTCTGCGCTTCTGATGCAACAAAATTTTAGTCCTGAGAATCTGAAACCCGGCATACCTCCATCCCACCCAAATATCCCATCTTCGTCACACTATCCCCCAATTTCAGAGTTCCAATCGGCTTCCCAGCAATTGCGTTCTCCGAATATGAGACCTCGTTCTTCCCATTCAAGGTCTTTGTCCCAACACTCATTTTTTTCCCCGGATTGCTTGCCTCCATTGAGTCCTTCACTTTATTGTGAGCCCTCGGCGACCCCTCTTTCTAACTCGATTTCCCCAGACGTGTCCATGGAAGAAAGTGTGGTTAACTCTCATGGCCCTGGCATTTCTATGCCCGTCAATAGGGATCATGCCTTTCAAGCTGGTCCTAGTGTTCTTCCTCGTAAAGGGCACAGGCGCTCCAGCAGTGATACTCCATTAGGAATCTCTGGCTTCGCTCAATCTTCTCCTCAGCTGGTTGTCTCTCCTACTTGGATGAATCTGGAGAATTCAATTTCTAGAGGAGAAAACTCAGGATTGGAGAAGCCAATTCAATTGGTAAAAAAGGAGCTAAAAAAGGATGAGGGTCATGTTGATAGTTACAATGCAAAACCTATGGTTGAGAGGAAAGAGGATGTGATGGATGATTTAATTAGCGTGTATATGAATTTGGACAATATTGATAATGTGAACTTATCTGGTGCGGAAGAATCAAAGACTTTTGAAAGCAGTGATAATGAAGTTGAGAGTCTTGTAAGTGGAAAAACTACCTCCACACAAGGGGCAACTTCGAGCTTTGTGGAGGAAAGGAGGGAAGGAATCAAGAGGAGTTCTAATGGGGACATTGCACCAGGCTCCCGTCATCGGAGAAGTTTTTCCTTGGATAGTTCTATAGGAAATTTGCATATTGGAGATGATTCACCAAAGCTTCCTCCTTTGGGGAATGGAGTTTGTCAGCGCTCACCTAGCAATTCAGCAGATGGTAAAACATTTGAGATCAACATGGAGTTGAGAAATGGTGAATTCACTGAACTGGAGCTAAAAAAAATAATGGAAAGTGATAAACTTGCTGAGATTGCTTCGTCAGATCCCAAACGTGCAAAAAGAATATTAGCTAATCGTCAATCGGCTGCTCGATCCAAGGAGCGAAAGGTGCAGTACATTGCTGAACTAGAGCACAAGGTGCAAACTCTTCAGTCAGAGACAACCACAATGTCTACTCAATTTACCACACTACAGAGGGATAACTCACATCTTAAAAGTGAGAACAGTGAGTTGAAATTCAGGCTTCAAGCCATGGAACAGCAGTCCCAACTGAAGGATGCTCTGAATGAGACCTTGACTGCTGAAGTCCAGCGTTTGAGGCTTGCAGTCACAGAACTTGGTGGCGAGCCTATTCTCTCGGGCTGCATAGCAGCTCGCCAACATGCTATTAATCAACAAAGGTTCCAATTGCAGCATGAGCAGCCTGGCCAGCTTAAACGATCGCAAATGCAACATCAGCCTCAGGAGGAGACCCAGCCTCAGTCGCACCAGATTCAACATAATGAATTGAATCTCCAGCCTCAAAATGACAAAGCTACTGCCTTCTGA 1761 0.4492 MNSFKYRPCKSMEGNQGIDPASTGTDTGMQLIGSAIFSSPGATLRPQNRFNAPSPNFNASQMGASALLMQQNFSPENLKPGIPPSHPNIPSSSHYPPISEFQSASQQLRSPNMRPRSSHSRSLSQHSFFSPDCLPPLSPSLYCEPSATPLSNSISPDVSMEESVVNSHGPGISMPVNRDHAFQAGPSVLPRKGHRRSSSDTPLGISGFAQSSPQLVVSPTWMNLENSISRGENSGLEKPIQLVKKELKKDEGHVDSYNAKPMVERKEDVMDDLISVYMNLDNIDNVNLSGAEESKTFESSDNEVESLVSGKTTSTQGATSSFVEERREGIKRSSNGDIAPGSRHRRSFSLDSSIGNLHIGDDSPKLPPLGNGVCQRSPSNSADGKTFEINMELRNGEFTELELKKIMESDKLAEIASSDPKRAKRILANRQSAARSKERKVQYIAELEHKVQTLQSETTTMSTQFTTLQRDNSHLKSENSELKFRLQAMEQQSQLKDALNETLTAEVQRLRLAVTELGGEPILSGCIAARQHAINQQRFQLQHEQPGQLKRSQMQHQPQEETQPQSHQIQHNELNLQPQNDKATAF 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0126 586 Gene3D - 418 481 - -
Prci2g0126 586 SMART brlzneu 417 481 IPR004827 GO:0003700|GO:0006355
Prci2g0126 586 MobiDBLite consensus disorder prediction 187 207 - -
Prci2g0126 586 MobiDBLite consensus disorder prediction 92 129 - -
Prci2g0126 586 Coils Coil 437 457 - -
Prci2g0126 586 Pfam bZIP transcription factor 421 479 IPR004827 GO:0003700|GO:0006355
Prci2g0126 586 MobiDBLite consensus disorder prediction 74 129 - -
Prci2g0126 586 MobiDBLite consensus disorder prediction 294 346 - -
Prci2g0126 586 SUPERFAMILY Leucine zipper domain 421 477 IPR046347 GO:0003700|GO:0006355
Prci2g0126 586 CDD bZIP_plant_RF2 422 472 IPR044759 GO:0003700|GO:0006355
Prci2g0126 586 Coils Coil 472 492 - -
Prci2g0126 586 MobiDBLite consensus disorder prediction 542 586 - -
Prci2g0126 586 FunFam probable transcription factor PosF21 420 473 - -
Prci2g0126 586 MobiDBLite consensus disorder prediction 1 28 - -
Prci2g0126 586 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 102 572 - -
Prci2g0126 586 MobiDBLite consensus disorder prediction 294 322 - -
Prci2g0126 586 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 419 482 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0126 Prci-Chr2 1014259 1018764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0126 55 540 bZIP Transcription Factor Family AT4G38900 44.767 3.47e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci2g0126 bZIP_1 4.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0126 - - pcin:129302979 1118.99