Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0125 ATGGGAAAATCTACTTCCTGCTTCAAATTAATCACATGCGGCGGGGATGCGGCGGACGGCAACGACGATTACCAAGTGTCCGAGATCAAAGATTCAAGTGACAAACGAGGTTGGAGTTTCCGAAAAAAATCTGCAAGGCATCGTGTGCTTAGCAATGCTGTAATTACAGACACCCCTTCCAGAGCAAATAAGGAGAGTTCAGAATGTACTAATGTCAATTTCCAACCATCAACCGAAACTATAATTGCTGAGAAGAGCCATACAACAAATTGCCCTGATGAGAAACCCCCATTATCATCTGTGGCAAACTCACAATTATCTGAAACAGTTGTCACTGAAACTGAGAGTAAGGTGGATGTGAATCCACCGGAGCCTGTGGTTATCACCATCCAAGCTGCCATCAGAGGGTTCATGGCTCAGGGAGCTTTGCTAAAGCTTAGGAATGTGGTGAAGTTGCAAGCTGCTGTTCGTGGGCATTTGGTTAGAAGGCATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATAGTTAAATTGCAACTCCTCGTGCGAGCTCGTCATGCACAGCAGTTGCATCAAGATAAGCATGGCAAAATTAATGGCTCAGAAATTTTGGGTAATGGAAATCACGTGAGTGAGTCAAGTGTGAAGTCCACTTCCATAGAGAAACTGCTGAGCAATAGGTTTGCTCATCAGCTGTTGAAATCCACACCAAAAGACAAACCAATCCATGTCAAATGCGATCCTTCCAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTTCCTCATTGGATTCTGCAGAGTCTAAAATAACAAGTTCAGTGGTGGAGCTATCAGACAACAACGAATCTAGCACTTCTGTGTTTCAATTGGAAACCGGGCTTCAGTCTGAAGTTTTTTGTCAGTCAGATGACTCAAAGATTACTGCTGAGGACTCTGTTGTGCCTTCAGAGGTTGAAGAGAAGGTGACTACTTATGATACTGGAAACTTAAGCTTTGAAGCAACCCATTCTATGTCTCTTGCCAAAGATGATTTGGAGCAGGCTCAGCCTGAAATGACAATTACTTTTGATGCTAAAGTAACCTCAGAAGACATTGATTCTCACCAAAATAAAATGGTGGCATCAGATGCAAATTCTCCTCAGGAGCTTAGTTCTCTTCCTGAGAAACCTGAAATTGACAGTGAACAGCCCGAAAGATCTATGAAAAGATTTGCCTCTGAGCAACTAGAGACTGAAGGAACCAAACTTGGGTATGCATCAAGAAAGGCTAGCAATCCAACTTTTATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTACAATGGCAAATTCAAGTAAGTCAAGCAGTTTGTCCAATAAAGATGCAACAGTTGAAGCACATGTGGACCCCATTTCTGTTGGCACAGACAGTGCATTTAGGTCAAAAGAGTTCTTGTTGGACAATTCTGCTCGCCTTCCTTTCAGGATTGGTGGCTCTGAATGTGGTACTGAACTCTCTATTTCTTCCACGCTTGATTCGCCAGACATATCTGAGATTGGGGCTACAGAAAATGAACCTGAAGCCAAGGATTTATCAGAAGGGCTTTGTAATTCTGACAATGCGATAAATCATGAGGATGTGGCCAATGTTTTTTGTACCACTCCAGCTTGTGACTTACCCAGATCTGCACTGGATCGGCCTGAGGCTGCGAATGACAAAGATGTCAGTAGCAAATCAGTACATTCAGCAGTAGTTGTTGATTCCAAAGAGCCAGCTCTTGAGTCTGAGAAAAACATATCTGATCTGCAAAGAGAACAGGTGGAGTCTGCTGTGCAAGATCTCAGAACATCTCCCGAAGCTTCACCCAGAAGCCATGTGACTGTCCCTGAATCTCAAGGAACACCTTCAAGTCAGGTGTCAGTGAAACCTATAGAGAGAAAACCTGAGAAGACTGGATCTGGATCAACGAGTAGACAAAAGCTTCTATCAGCTGGTAAAAAATCACCTGCGAATGCAACGCCTGATTCAGGATCTAGAGGTAGTAGGGAACAGCTGCCTAAAGATCAGGGGAGTGGGAAGAGGCGCAATTCATTTGGCTCAGCAAAACCTGATCACGTTAATCAAGAATCAAGAGATAATGGTAACAATAGTTCCCTTCCTCATTTCATGCAAGCCACAGAATCTGCCAGGGCCAAGATCGATGCTAATAATTCTCCACGATCAAGTCCAGACTTTCATGACCGTGAGGTGCATGTTAAGAAGAGACACTCCTTGCCTGGTGCAAGTGCAACTGGTAGACAGGTTTCTCCACGCATCCAGCGCTCAATTTCTCAGGCACAGCAGGGTTCGAAAGGACAAGAGAGGAAGTGGCAGAGGTGA 2370 0.443 MGKSTSCFKLITCGGDAADGNDDYQVSEIKDSSDKRGWSFRKKSARHRVLSNAVITDTPSRANKESSECTNVNFQPSTETIIAEKSHTTNCPDEKPPLSSVANSQLSETVVTETESKVDVNPPEPVVITIQAAIRGFMAQGALLKLRNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKLQLLVRARHAQQLHQDKHGKINGSEILGNGNHVSESSVKSTSIEKLLSNRFAHQLLKSTPKDKPIHVKCDPSKADSAWKWLERWMSVSSLDSAESKITSSVVELSDNNESSTSVFQLETGLQSEVFCQSDDSKITAEDSVVPSEVEEKVTTYDTGNLSFEATHSMSLAKDDLEQAQPEMTITFDAKVTSEDIDSHQNKMVASDANSPQELSSLPEKPEIDSEQPERSMKRFASEQLETEGTKLGYASRKASNPTFIAAQSKFEELSTMANSSKSSSLSNKDATVEAHVDPISVGTDSAFRSKEFLLDNSARLPFRIGGSECGTELSISSTLDSPDISEIGATENEPEAKDLSEGLCNSDNAINHEDVANVFCTTPACDLPRSALDRPEAANDKDVSSKSVHSAVVVDSKEPALESEKNISDLQREQVESAVQDLRTSPEASPRSHVTVPESQGTPSSQVSVKPIERKPEKTGSGSTSRQKLLSAGKKSPANATPDSGSRGSREQLPKDQGSGKRRNSFGSAKPDHVNQESRDNGNNSSLPHFMQATESARAKIDANNSPRSSPDFHDREVHVKKRHSLPGASATGRQVSPRIQRSISQAQQGSKGQERKWQR 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0125 789 SMART iq_5 144 166 IPR000048 GO:0005515
Prci2g0125 789 MobiDBLite consensus disorder prediction 759 789 - -
Prci2g0125 789 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Prci2g0125 789 Pfam Protein of unknown function (DUF4005) 683 778 IPR025064 -
Prci2g0125 789 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Prci2g0125 789 MobiDBLite consensus disorder prediction 392 413 - -
Prci2g0125 789 MobiDBLite consensus disorder prediction 601 638 - -
Prci2g0125 789 MobiDBLite consensus disorder prediction 565 789 - -
Prci2g0125 789 Gene3D - 124 170 - -
Prci2g0125 789 Pfam IQ calmodulin-binding motif 127 139 IPR000048 GO:0005515
Prci2g0125 789 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Prci2g0125 789 MobiDBLite consensus disorder prediction 376 421 - -
Prci2g0125 789 MobiDBLite consensus disorder prediction 651 737 - -
Prci2g0125 789 PANTHER IQ-DOMAIN 5-RELATED 1 762 - -
Prci2g0125 789 MobiDBLite consensus disorder prediction 738 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0125 Prci-Chr2 1001417 1008065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0125 110 789 IQD Protein Family AT1G19870 37.752 2.07e-103 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0125 - - gmx:100799424 932.169