Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0124 ATGGGAAAATCTACTTCCTGCTTCAAATTAATCACATGCGGCGGGGATGCGGCGGACGGCAACGACGATTACCAAGTGTCCGAGATCAAAGATTCAAGTGACAAACGAGGTTGGAGTTTCCGAAAAAAATCTGCAAGGCATCGTGTGCTTAGCAATGCTGTAATTACAGACACCCCTTCCAGAGCAAATAAGGAGAGTTCAGAATGTACTAATGTCAATTTCCAACCATCAACCGAAACTATAATTGCTGAGAAGAGCCATACAACAAATTGCCCTGATGAGAAACCCCCATTATCATCTGTGGCAAACTCACAATTATCTGAAACAGTTGTCACTGAAACTGAGAGTAAGGTGGATGTGAATCCACCGGAGCCTGTGGTTATCACCATCCAAGCTGCCATCAGAGGGTTCATGGCTCAGGGAGCTTTGCTAAAGCTTAGGAATGTGGTGAAGTTGCAAGCTGCTGTTCGTGGGCATTTGGTTAGAAGGCATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATAGTTAAATTGCAACTCCTCGTGCGAGCTCGTCATGCACAGCAGTTGCATCAAGATAAGCATGGCAAAATTAATGGCTCAGAAATTTTGGGTAATGGAAATCACGTGAGTGAGTCAAGTGTGAAGTCCACTTCCATAGAGAAACTGCTGAGCAATAGGTTTGCTCATCAGCTGTTGAAATCCACACCAAAAGACAAACCAATCCATGTCAAATGCGATCCTTCCAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTTCCTCATTGGATTCTGCAGAGTCTAAAATAACAAGTTCAGTGGTGGAGCTATCAGACAACAACGAATCTAGCACTTCTGTGTTTCAATTGGAAACCGGGCTTCAGTCTGAAGTTTTTTGTCAGTCAGATGACTCAAAGATTACTGCTGAGGACTCTGTTGTGCCTTCAGAGGTTGAAGAGAAGGTGACTACTTATGATACTGGAAACTTAAGCTTTGAAGCAACCCATTCTATGTCTCTTGCCAAAGATGATTTGGAGCAGGCTCAGCCTGAAATGACAATTACTTTTGATGCTAAAGTAACCTCAGAAGACATTGATTCTCACCAAAATAAAATGGTGGCATCAGATGCAAATTCTCCTCAGGAGCTTAGTTCTCTTCCTGAGAAACCTGAAATTGACAGTGAACAGCCCGAAAGATCTATGAAAAGATTTGCCTCTGAGCAACTAGAGACTGAAGGAACCAAACTTGGGTATGCATCAAGAAAGGCTAGCAATCCAACTTTTATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTACAATGGCAAATTCAAGTAAGTCAAGCAGTTTGTCCAATAAAGATGCAACAGTTGAAGCACATGTGGACCCCATTTCTGTTGGCACAGACAGTGCATTTAGGTCAAAAGAGTTCTTGTTGGACAATTCTGCTCGCCTTCCTTTCAGGATTGGTGGCTCTGAATGTGGTACTGAACTCTCTATTTCTTCCACGCTTGATTCGCCAGACATATCTGAGATTGGGGCTACAGAAAATGAACCTGAAGCCAAGGATTTATCAGAAGGGCTTTGTAATTCTGACAATGCGATAAATCATGAGGATGTGGCCAATGTTTTTTGTACCACTCCAGCTTGTGACTTACCCAGATCTGCACTGGATCGGCCTGAGGCTGCGAATGACAAAGATGTCAGTAGCAAATCAGTACATTCAGCAGTAGTTGTTGATTCCAAAGAGCCAGCTCTTGAGTCTGAGAAAAACATATCTGATCTGCAAAGAGAACAGGTGGAGTCTGCTGTGCAAGATCTCAGAACATCTCCCGAAGCTTCACCCAGAAGCCATGTGACTGTCCCTGAATCTCAAGGAACACCTTCAAGTCAGGTGTCAGTGAAACCTATAGAGAGAAAACCTGAGAAGACTGGATCTGGATCAACGAGTAGACAAAAGCTTCTATCAGCTGGTAAAAAATCACCTGCGAATGCAACGCCTGATTCAGGATCTAGAGGTAGTAGGGAACAGCTGCCTAAAGATCAGGGGAGTGGGAAGAGGCGCAATTCATTTGGCTCAGCAAAACCTGATCACGTTAATCAAGAATCAAGAGATAATGGTAACAATAGTTCCCTTCCTCATTTCATGCAAGCCACAGAATCTGCCAGGGCCAAGATCGATGCTAATAATTCTCCACGATCAAGTCCAGACTTTCATGACCGTGAGGTGCATGTTAAGAAGAGACACTCCTTGCCTGGTGCAAGTGCAACTGGTAGACAGGTTTCTCCACGCATCCAGCGCTCAATTTCTCAGGCACAGCAGGGTTCGAAAGGACAAGGTTTGCATTCTCCTCGTGAGAGGAAGTGGCAGAGGTGA 2388 0.4435 MGKSTSCFKLITCGGDAADGNDDYQVSEIKDSSDKRGWSFRKKSARHRVLSNAVITDTPSRANKESSECTNVNFQPSTETIIAEKSHTTNCPDEKPPLSSVANSQLSETVVTETESKVDVNPPEPVVITIQAAIRGFMAQGALLKLRNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKLQLLVRARHAQQLHQDKHGKINGSEILGNGNHVSESSVKSTSIEKLLSNRFAHQLLKSTPKDKPIHVKCDPSKADSAWKWLERWMSVSSLDSAESKITSSVVELSDNNESSTSVFQLETGLQSEVFCQSDDSKITAEDSVVPSEVEEKVTTYDTGNLSFEATHSMSLAKDDLEQAQPEMTITFDAKVTSEDIDSHQNKMVASDANSPQELSSLPEKPEIDSEQPERSMKRFASEQLETEGTKLGYASRKASNPTFIAAQSKFEELSTMANSSKSSSLSNKDATVEAHVDPISVGTDSAFRSKEFLLDNSARLPFRIGGSECGTELSISSTLDSPDISEIGATENEPEAKDLSEGLCNSDNAINHEDVANVFCTTPACDLPRSALDRPEAANDKDVSSKSVHSAVVVDSKEPALESEKNISDLQREQVESAVQDLRTSPEASPRSHVTVPESQGTPSSQVSVKPIERKPEKTGSGSTSRQKLLSAGKKSPANATPDSGSRGSREQLPKDQGSGKRRNSFGSAKPDHVNQESRDNGNNSSLPHFMQATESARAKIDANNSPRSSPDFHDREVHVKKRHSLPGASATGRQVSPRIQRSISQAQQGSKGQGLHSPRERKWQR 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0124 795 Pfam Protein of unknown function (DUF4005) 695 778 IPR025064 -
Prci2g0124 795 SMART iq_5 144 166 IPR000048 GO:0005515
Prci2g0124 795 Pfam IQ calmodulin-binding motif 127 139 IPR000048 GO:0005515
Prci2g0124 795 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Prci2g0124 795 MobiDBLite consensus disorder prediction 759 784 - -
Prci2g0124 795 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Prci2g0124 795 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Prci2g0124 795 MobiDBLite consensus disorder prediction 392 413 - -
Prci2g0124 795 MobiDBLite consensus disorder prediction 601 638 - -
Prci2g0124 795 Gene3D - 124 170 - -
Prci2g0124 795 PANTHER IQ-DOMAIN 5-RELATED 1 762 - -
Prci2g0124 795 MobiDBLite consensus disorder prediction 565 795 - -
Prci2g0124 795 MobiDBLite consensus disorder prediction 376 421 - -
Prci2g0124 795 MobiDBLite consensus disorder prediction 651 737 - -
Prci2g0124 795 MobiDBLite consensus disorder prediction 738 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0124 Prci-Chr2 1001417 1008071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0124 110 795 IQD Protein Family AT1G19870 37.429 1.30e-102 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0124 - - gmx:100799424 942.954