Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0123 ATGGGAAAATCTACTTCCTGCTTCAAATTAATCACATGCGGCGGGGATGCGGCGGACGGCAACGACGATTACCAAGTGTCCGAGATCAAAGATTCAAGTGACAAACGAGGTTGGAGTTTCCGAAAAAAATCTGCAAGGCATCGTGTGCTTAGCAATGCTGTAATTACAGACACCCCTTCCAGAGCAAATAAGGAGAGTTCAGAATGTACTAATGTCAATTTCCAACCATCAACCGAAACTATAATTGCTGAGAAGAGCCATACAACAAATTGCCCTGATGAGAAACCCCCATTATCATCTGTGGCAAACTCACAATTATCTGAAACAGTTGTCACTGAAACTGAGAGTAAGGTGGATGTGAATCCACCGGAGCCTGTGGTTATCACCATCCAAGCTGCCATCAGAGGGTTCATGGCTCAGGGAGCTTTGCTAAAGCTTAGGAATGTGGTGAAGTTGCAAGCTGCTGTTCGTGGGCATTTGGTTAGAAGGCATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATAGTTAAATTGCAACTCCTCGTGCGAGCTCGTCATGCACAGCAGTTGCATCAAGATAAGCATGGCAAAATTAATGGCTCAGAAATTTTGCTGTTGAAATCCACACCAAAAGACAAACCAATCCATGTCAAATGCGATCCTTCCAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTTCCTCATTGGATTCTGCAGAGTCTAAAATAACAAGTTCAGTGGTGGAGCTATCAGACAACAACGAATCTAGCACTTCTGTGTTTCAATTGGAAACCGGGCTTCAGTCTGAAGTTTTTTGTCAGTCAGATGACTCAAAGATTACTGCTGAGGACTCTGTTGTGCCTTCAGAGGTTGAAGAGAAGGTGACTACTTATGATACTGGAAACTTAAGCTTTGAAGCAACCCATTCTATGTCTCTTGCCAAAGATGATTTGGAGCAGGCTCAGCCTGAAATGACAATTACTTTTGATGCTAAAGTAACCTCAGAAGACATTGATTCTCACCAAAATAAAATGGTGGCATCAGATGCAAATTCTCCTCAGGAGCTTAGTTCTCTTCCTGAGAAACCTGAAATTGACAGTGAACAGCCCGAAAGATCTATGAAAAGATTTGCCTCTGAGCAACTAGAGACTGAAGGAACCAAACTTGGGTATGCATCAAGAAAGGCTAGCAATCCAACTTTTATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTACAATGGCAAATTCAAGTAAGTCAAGCAGTTTGTCCAATAAAGATGCAACAGTTGAAGCACATGTGGACCCCATTTCTGTTGGCACAGACAGTGCATTTAGGTCAAAAGAGTTCTTGTTGGACAATTCTGCTCGCCTTCCTTTCAGGATTGGTGGCTCTGAATGTGGTACTGAACTCTCTATTTCTTCCACGCTTGATTCGCCAGACATATCTGAGATTGGGGCTACAGAAAATGAACCTGAAGCCAAGGATTTATCAGAAGGGCTTTGTAATTCTGACAATGCGATAAATCATGAGGATGTGGCCAATGTTTTTTGTACCACTCCAGCTTGTGACTTACCCAGATCTGCACTGGATCGGCCTGAGGCTGCGAATGACAAAGATGTCAGTAGCAAATCAGTACATTCAGCAGTAGTTGTTGATTCCAAAGAGCCAGCTCTTGAGTCTGAGAAAAACATATCTGATCTGCAAAGAGAACAGGTGGAGTCTGCTGTGCAAGATCTCAGAACATCTCCCGAAGCTTCACCCAGAAGCCATGTGACTGTCCCTGAATCTCAAGGAACACCTTCAAGTCAGGTGTCAGTGAAACCTATAGAGAGAAAACCTGAGAAGACTGGATCTGGATCAACGAGTAGACAAAAGCTTCTATCAGCTGGTAAAAAATCACCTGCGAATGCAACGCCTGATTCAGGATCTAGAGGTAGTAGGGAACAGCTGCCTAAAGATCAGGGGAGTGGGAAGAGGCGCAATTCATTTGGCTCAGCAAAACCTGATCACGTTAATCAAGAATCAAGAGATAATGGTAACAATAGTTCCCTTCCTCATTTCATGCAAGCCACAGAATCTGCCAGGGCCAAGATCGATGCTAATAATTCTCCACGATCAAGTCCAGACTTTCATGACCGTGAGGTGCATGTTAAGAAGAGACACTCCTTGCCTGGTGCAAGTGCAACTGGTAGACAGGTTTCTCCACGCATCCAGCGCTCAATTTCTCAGGCACAGCAGGGTTCGAAAGGACAAGGTTTGCATTCTCCTCGTGAGAGGAAGTGGCAGAGGTGA 2307 0.4434 MGKSTSCFKLITCGGDAADGNDDYQVSEIKDSSDKRGWSFRKKSARHRVLSNAVITDTPSRANKESSECTNVNFQPSTETIIAEKSHTTNCPDEKPPLSSVANSQLSETVVTETESKVDVNPPEPVVITIQAAIRGFMAQGALLKLRNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKLQLLVRARHAQQLHQDKHGKINGSEILLLKSTPKDKPIHVKCDPSKADSAWKWLERWMSVSSLDSAESKITSSVVELSDNNESSTSVFQLETGLQSEVFCQSDDSKITAEDSVVPSEVEEKVTTYDTGNLSFEATHSMSLAKDDLEQAQPEMTITFDAKVTSEDIDSHQNKMVASDANSPQELSSLPEKPEIDSEQPERSMKRFASEQLETEGTKLGYASRKASNPTFIAAQSKFEELSTMANSSKSSSLSNKDATVEAHVDPISVGTDSAFRSKEFLLDNSARLPFRIGGSECGTELSISSTLDSPDISEIGATENEPEAKDLSEGLCNSDNAINHEDVANVFCTTPACDLPRSALDRPEAANDKDVSSKSVHSAVVVDSKEPALESEKNISDLQREQVESAVQDLRTSPEASPRSHVTVPESQGTPSSQVSVKPIERKPEKTGSGSTSRQKLLSAGKKSPANATPDSGSRGSREQLPKDQGSGKRRNSFGSAKPDHVNQESRDNGNNSSLPHFMQATESARAKIDANNSPRSSPDFHDREVHVKKRHSLPGASATGRQVSPRIQRSISQAQQGSKGQGLHSPRERKWQR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0123 768 SMART iq_5 144 166 IPR000048 GO:0005515
Prci2g0123 768 MobiDBLite consensus disorder prediction 574 611 - -
Prci2g0123 768 MobiDBLite consensus disorder prediction 711 726 - -
Prci2g0123 768 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Prci2g0123 768 MobiDBLite consensus disorder prediction 732 757 - -
Prci2g0123 768 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Prci2g0123 768 MobiDBLite consensus disorder prediction 538 768 - -
Prci2g0123 768 Pfam Protein of unknown function (DUF4005) 656 751 IPR025064 -
Prci2g0123 768 MobiDBLite consensus disorder prediction 624 710 - -
Prci2g0123 768 MobiDBLite consensus disorder prediction 349 395 - -
Prci2g0123 768 MobiDBLite consensus disorder prediction 365 386 - -
Prci2g0123 768 PANTHER IQ-DOMAIN 5-RELATED 1 735 - -
Prci2g0123 768 Pfam IQ calmodulin-binding motif 127 139 IPR000048 GO:0005515
Prci2g0123 768 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Prci2g0123 768 Gene3D - 124 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0123 Prci-Chr2 1001417 1008071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0123 110 768 IQD Protein Family AT1G19870 36.957 1.62e-96 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0123 - - gmx:100799424 898.656