Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0122 ATGCTAAATATGCGTTGTTTACACAAATCGAAAAGAGTTTCGTGGGCCTCAGATTTAGATCTTTGTCAGGCTGACGCAGTAGAACTCTGCTGCTTAGAAGCATTCGTTGCCTTTCATTATAAAATTCTATTCTTTTTTCTGTTTGAAAGGAGACTAAGCGCAAGATCTCAGCCGCTTCAAACAAGGTCTGGAGACCTACTGAGGGTGAATGCAAAACTATTGGATGAAAAGGTTAGATTATTTTTATCAGAGGAATGTCCTTCAGAAGTTGGGTTGAATGCTCAAGATCACCTCCAAGCGAAGACATCATTACTTTTTCATCCAGGAGGAGCAGGTTCTGATGACATTCTACCTCCTGGCTTTGAGGGAACTCAATCCTCAAGTCAGATGCAGATTAAGCTCTCCCAAATTCCAGTGATGAAATGGACCAATCCACTTGAGATTGTGCTTAATCTCACATGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGCTAGAGGATCAAAATCAGCGAGAGATGAAAGTGCTTGAAGCTATTTATCCCCGCCCATCTTCCATTCCCCCAAACCCCTCTGTCTCAATGGATGTTGAAGATTCCCTTTGCAATGATGATCATACTGCTTTGATACCAATTACGCCAATTGAAGATGAAGATTCCACAGTAGATGCACCTTCTGGAGTGCCACCTAGTTCACAGCCTCTTTTATTTGTTGCTGGAGTACCCAAGGGTTTAACTGATGTAGTAGAATCTAACGATGTTGCTGCTGAAGCATCTGTAACTTTAAACCATATCATGAAGAACAATGAACATGGAAATTCGATAGACCATGAATTGCTAAATAAAATTCTCAGCAACCCAGAAGTGATTGAGAAGTTGGTTAGAGATTATGGAAATACAGATAACTCTCAACATACACCCAATGCTGGGTCATCCTTGGTGTCTTCACGTCCACCTATTCCTCTGAATCAAGCTGAAACAGGTGCACCTTCATTTGGTGCTTTTTCGGCCAGCCCTTCCTATCCTGCCCAGATTGGGGGTGGAGTGGGACCTGTTCCTCCTCAACGGGTCCCTCCGCCTGTAGTTAGTCTTGGAGCACCGCCAGCAAAGGATGTGAACTACTACAAGAACTTAATTCAGCAACATGGTGGAGAAAGACGAGAGACTCCTTACTTGAACAACCTTAGGCAGCCCATAGGAAACCAGGAAACAACACACAATTCTAGATCAAGGGAACCAAAACCCAAGATAATGAAGCCTTGTATCTATTTCAACAGTTCAAAAGGATGTCGGAATGGAGCTAACTGTGCATACCAGCATGATGCGGCATTTCAGCCCCGGGGTAGTGCTGTGCCAGGCGTACAAAGTTCGAAGAGAGCTAAAATGGATAGCGAGATTACCAATTGGTTAGACTCTTGA 1416 0.4371 MLNMRCLHKSKRVSWASDLDLCQADAVELCCLEAFVAFHYKILFFFLFERRLSARSQPLQTRSGDLLRVNAKLLDEKVRLFLSEECPSEVGLNAQDHLQAKTSLLFHPGGAGSDDILPPGFEGTQSSSQMQIKLSQIPVMKWTNPLEIVLNLTWQVVAGEESKELEDQNQREMKVLEAIYPRPSSIPPNPSVSMDVEDSLCNDDHTALIPITPIEDEDSTVDAPSGVPPSSQPLLFVAGVPKGLTDVVESNDVAAEASVTLNHIMKNNEHGNSIDHELLNKILSNPEVIEKLVRDYGNTDNSQHTPNAGSSLVSSRPPIPLNQAETGAPSFGAFSASPSYPAQIGGGVGPVPPQRVPPPVVSLGAPPAKDVNYYKNLIQQHGGERRETPYLNNLRQPIGNQETTHNSRSREPKPKIMKPCIYFNSSKGCRNGANCAYQHDAAFQPRGSAVPGVQSSKRAKMDSEITNWLDS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0122 471 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 7 462 - -
Prci2g0122 471 MobiDBLite consensus disorder prediction 446 471 - -
Prci2g0122 471 ProSiteProfiles Zinc finger C3H1-type profile. 414 442 IPR000571 GO:0046872
Prci2g0122 471 MobiDBLite consensus disorder prediction 297 329 - -
Prci2g0122 471 MobiDBLite consensus disorder prediction 297 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0122 Prci-Chr2 981435 986955 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci2g0122 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0122 - - pcin:129303333 921.768