Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0117 ATGTCTGCCGGAATCGGAAAATGCAGCAAAATCCGCCACATTGTCAGGCTGCGCCAGATGCTGCGACAGTGGCGCAACAAGGCTCGCATGTCTGCCAGTCGCATACCCTCGGATGTGCCCGCCGGACACGTGGCCGTATGCGTGGGCAACAACTCCAGGAGATTTGTGGTGCGTGCTTCCTACCTGAACCATCCCGTCTTCAAGAAGCTTCTGGTTCAAGCCGAGGAAGAGTACGGGTTCTCTAATCATGGGCCCCTGGCGATTCCCTGCGACGAAGCCGTGTTCGAAGAGGTTCTTCGGTCTATTTCGGGCTCGGAGTCAGGGAGGTCGGGCCGATTTGCTAATCCAGTGGAGATTCAAAGGCACTGCCACGCGGGAATGAGGAGCAATCTTGAGGTGTGGGCCGAATCTCGGCCGCTACTTAATGGTTTCACTGAAAAAACGATTTGGTAG 453 0.5585 MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSASRIPSDVPAGHVAVCVGNNSRRFVVRASYLNHPVFKKLLVQAEEEYGFSNHGPLAIPCDEAVFEEVLRSISGSESGRSGRFANPVEIQRHCHAGMRSNLEVWAESRPLLNGFTEKTIW 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0117 150 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733
Prci2g0117 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0117 Prci-Chr2 922753 923766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0117 5 149 Calmodulin-binding Proteins AT4G34750 53.289 6.84e-48 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0117 K14488 - qsa:O6P43_018667 256.529