Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0110 ATGGCTCTCCTAACTTTCTTGCCCGAACAGTCAGATTCAGTGCCCAACTCACAAGTTCCAAAACGCAAGCGAAATAAGCCACAGAAGCAGAAGCAGAAACCACCGTCTTCATGGGATCAAATCAAGAATCTCCTCACCTGCAAACAGATCCAAGGGTCGAGAGTGCACGACCCTTCCAAAAACCCCGCTCCGGTGGGCTACTCCAAGATAGGATCTTCTTGCAGCTCCTTCTGCAGCTTCAAAGACGCTGTTCATGGCAACACACGTGTTGTTCACAGGCCTGATAACTCCTCGCCGGAGAGCAGTGCTCTGGGTCAGCAAACTGGGTTGCTGAGCCGCAAGCCTCCAAATAACTCGTCATCCCGGCAGGCCAAATCCAACGGCGCTCCGACCTGCGCTTCATCATCCAGAGGGATGCAATTCAGGAAACTCTCCGGCTGTTATGAATGTCGAATGATTGTTGACCCTTCCAGGCTCCCAATTCCGAGAAACACTCTATGTTCTTGCCCTCACTGTGGAGAGTTTTTCCCCAAGATGGAAAGCTTGGAGCTTCATCAAGCTACTCGCCATGCCGTTTCAGAGCTGGGTCCGGAGGATTCGAGTCGAAATATTGTGGAGATAATATTCAAATCAAGCTGGGTCAAGAAGGGCAGCCCGATCTGTAAGATCGAACGGATACTCAAAGTCCACAACACGCAGCGCACCGTCCAACGGTTCGAGGAGTGCCGAGACGCAGTGAAGAGTCGTGCTCGGTACAGCGGCAAGAAGAATCCCAGGTGCGCAGCCGACGGGAACGAGCTGTTGCGATTCCACTGCACCACCCTCTCATGCGCCTTGGGTGCATGTGGCTCCTCCTCCTTGTGCGGCTCCCTCCCCGGCTGCGGCGTTTGCACCATCATCCGCCACGGATTCCAGGGCAAGTCTGATAGTGCCGGCGGCGCTGAACAACACCACTGCAAGGGAGTGCGGACCACGGCCAGCAGCGGTAGGGGCCACGACGCCTTGCAGGGCAGCGACACCAGGAGGGCGATGCTGGTGTGCCGTGTCATTGCCGGGAGGGTGAAGCGCGTGGCGGAGGAGACGCTGGCGGAGGAGGAGACAATATCGGCTGGGTCGTATGACTCGGTAGCAGGTTGCGCCGGGATCTACTCGAATATCGAGGAGTTGGTAGTGTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTTGTGATCTACAGAGTGGTGCCATGCTGA 1233 0.5572 MALLTFLPEQSDSVPNSQVPKRKRNKPQKQKQKPPSSWDQIKNLLTCKQIQGSRVHDPSKNPAPVGYSKIGSSCSSFCSFKDAVHGNTRVVHRPDNSSPESSALGQQTGLLSRKPPNNSSSRQAKSNGAPTCASSSRGMQFRKLSGCYECRMIVDPSRLPIPRNTLCSCPHCGEFFPKMESLELHQATRHAVSELGPEDSSRNIVEIIFKSSWVKKGSPICKIERILKVHNTQRTVQRFEECRDAVKSRARYSGKKNPRCAADGNELLRFHCTTLSCALGACGSSSLCGSLPGCGVCTIIRHGFQGKSDSAGGAEQHHCKGVRTTASSGRGHDALQGSDTRRAMLVCRVIAGRVKRVAEETLAEEETISAGSYDSVAGCAGIYSNIEELVVFNPKAILPCFVVIYRVVPC 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0110 410 MobiDBLite consensus disorder prediction 89 136 - -
Prci2g0110 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 167 195 IPR013087 -
Prci2g0110 410 Gene3D - 191 407 - -
Prci2g0110 410 MobiDBLite consensus disorder prediction 91 136 - -
Prci2g0110 410 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 36 405 - -
Prci2g0110 410 MobiDBLite consensus disorder prediction 1 39 - -
Prci2g0110 410 SUPERFAMILY ADP-ribosylation 192 406 - -
Prci2g0110 410 ProSitePatterns Zinc finger C2H2 type domain signature. 167 190 IPR013087 -
Prci2g0110 410 FunFam C2H2-like zinc finger protein 191 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0110 Prci-Chr2 870833 873401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0110 1 408 C2H2 Transcription Factor Family AT1G75710 60.215 3.77e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci2g0110 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0110 - - gmx:100816726 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0110 2 870833 873401 Prci2g0110 2 870833 873401 ECH