Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci2g0102 | ATGGAACTTTACGCTGACACTACCCCTCACACTGCCAACAACTTCCGTACCCTTTGCACTGGTAAAAAGGGCCCTGGTCGTAGCGGCAAGCCCCTCCATTACAAGGGTTCCACCTTCCACCACGTCATCCTAAGCTTCATGTGCCAGGGTAGCAATTTCACCTCCGACAATGGCACCGGTGGCGAGTCCATCTATGGAGCCAAGTTTAAAGATGAGAATTTCATTAAGAAGCACACCGGTCTAAGGGTTTTATCCATGGCCAACGCTGGTCCCGGCACCAATGGATCACAGTTCTTTATTTGTACTGCCAAGATGGAGTGGCTCGATGGTAAACATGTGGTGTTTGGACAGGTCGTGGAGGGTATGGAGGTGGTCAAGGCTATAGAGGCCGCTGGATCTTCCTCCAGAAAAACCTCCAAGGCCGTCATCGTTGCCGACTACGGCCAGATTTCTTGA | 456 | 0.5154 | MELYADTTPHTANNFRTLCTGKKGPGRSGKPLHYKGSTFHHVILSFMCQGSNFTSDNGTGGESIYGAKFKDENFIKKHTGLRVLSMANAGPGTNGSQFFICTAKMEWLDGKHVVFGQVVEGMEVVKAIEAAGSSSRKTSKAVIVADYGQIS | 151 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci2g0102 | 151 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 97 | 109 | IPR002130 | GO:0000413|GO:0003755 | |
| Prci2g0102 | 151 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 39 | 51 | IPR002130 | GO:0000413|GO:0003755 | |
| Prci2g0102 | 151 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 3 | 18 | IPR002130 | GO:0000413|GO:0003755 | |
| Prci2g0102 | 151 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 110 | 125 | IPR002130 | GO:0000413|GO:0003755 | |
| Prci2g0102 | 151 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 82 | 97 | IPR002130 | GO:0000413|GO:0003755 | |
| Prci2g0102 | 151 | PIRSF | Peptidylpro_ismrse | 1 | 151 | IPR024936 | GO:0003755 | |
| Prci2g0102 | 151 | SUPERFAMILY | Cyclophilin-like | 1 | 150 | IPR029000 | - | |
| Prci2g0102 | 151 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 149 | IPR002130 | GO:0000413|GO:0003755 | |
| Prci2g0102 | 151 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 149 | - | - | |
| Prci2g0102 | 151 | FunFam | Peptidyl-prolyl cis-trans isomerase | 1 | 150 | - | - | |
| Prci2g0102 | 151 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 2 | 146 | IPR002130 | GO:0000413|GO:0003755 | |
| Prci2g0102 | 151 | Gene3D | - | 1 | 151 | IPR029000 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci2g0102 | Prci-Chr2 | 820505 | 821308 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci2g0102 | 1 | 129 | U-box Gene Family | AT5G67530 | 45.385 | 9.04e-25 | 97.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci2g0102 | K01802 | - | msin:131243497 | 255.758 |