Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0071 ATGGGACTTGGTTTCTTCAAGGCGCTTTGCTGCAGCAACTCGCGCCACGAAATTCCCATCCACTCATCCGACTCCCCTCCGCCAGGGGAATCCAGGCGGAGGAAGCCAACGACAACTTACGCGGTGGGGCCGGTGCTGGGGAAACCGTACGTGGACATAGGGAAGATGTACGAGCTGGAGAAGGAACTGGGGAGGGGGCTCGGGGTGACGTATCTGTGCACAGAGAAGGCGACGGGGAGAAAGTACGCGTGCAAAAGCATAGCGAGGGGGAAGCTGACGAGGAAGGAGGAAATAGATGACGTGCGGAGAGAGATACAGATACTGCAGCATCTGTCGGGGCAGCCCAACATAGTGGAATTCAGGGGCGCCTACGAGGACTGGCAGAACGTGTACTTGGTCATGGAACTCTGCACCGGCGGCGAGCTGTTTGACCGCATCATCGCCAAAGGCAATTATTCCGAGAAGGAGGCTGCGGCGCTGTGCCGCCAGATCGTCACGGTGGTTCACGTCTGCCATTTCATGGGAGTCATGCACAGGGACCTGAAGCCCGAGAATTTCTTGTTGGCCGGCCCCCACGATGATGCCCCCATCAAGGCCACCGATTTTGGACTCTCCGTCTTCATCGAGCCCGATAAACAGTATAAGGAAGTTGTAGGAAGTGCGTACTATGTAGCCCCAGAGGTTCTAAAACGGAGTTATGGGAAGGAGATAGATGTGTGGAGTGCAGGAGTCATTTTATACATCCTCCTTAGTGGGTCGCCTCCATTTTGGGCTGAGAACGAGAAAGGCATATTTGATGCTATTCTGGAAGGCAAACTGGATTTTGAAACCGGACCATGGCCTTCTATTTCAGCTTCTGCCAAGGATCTGATCAGTAAGATGTTGGAATACGATCCAAAGAAACGCATCACAGCTGCTGATGCCCTTGAACATCCATGGATGAAGGTGGGCGGTCAAGCATCTGACAAGCCTATAGACAGTGCCGTTTTGATTAGGATGAAGCAGTTCAGAGCAATGAACAAAATGAAGAAACTTGCCCTGAAGGTAATAGCAGAAAACCTCTCTGAGGAAGAAATCAAGGGCTTGAAACAAATGTTCAACAACATGGATACAGATAACAGTGGTACAATCACACTGGAAGAACTCAGAGTTGGACTGTCCAAATTGGGATCCAAACTTAATGAATCTGAAATACGGCAGCTGATGGATGCTGCCGATGTTGACAAGAATGGAACTATTGATTATTATGAATTCATAAGTGCTACCATGCATCGGCACAGACTTGAGAAGGAAGAGAACTTGTTCAATGCCTTCCGATACTTCGACAAGGATAGCAGTGGATTTATTACAAGAGAGGAGCTCAGGCAGGCTTTGACTGAACATGGAATGGGGGATGAAGCTGCAATAGATGAAGTGATTGACGACGTGGACACTGATAAAGATGGCAGAATCAATTACGAAGAGTTTGCGGCCATGATGAAGAGCGCGGGATAA 1494 0.4993 MGLGFFKALCCSNSRHEIPIHSSDSPPPGESRRRKPTTTYAVGPVLGKPYVDIGKMYELEKELGRGQXGVTYLCTEKATGRKYACKSIARGKLTRKEEIDDVRREIQILQHLSGQPNIVEFRGAYEDWQNVYLVMELCTGGELFDRIIAKGNYSEKEAAALCRQIVTVVHVCHFMGVMHRDLKPENFLLAGPHDDAPIKATDFGLSVFIEPDKQYKEVVGSAYYVAPEVLKRSYGKEIDVWSAGVILYILLSGSPPFWAENEKGIFDAILEGKLDFETGPWPSISASAKDLISKMLEYDPKKRITAADALEHPWMKVGGQASDKPIDSAVLIRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDNSGTITLEELRVGLSKLGSKLNESEIRQLMDAADVDKNGTIDYYEFISATMHRHRLEKEENLFNAFRYFDKDSSGFITREELRQALTEHGMGDEAAIDEVIDDVDTDKDGRINYEEFAAMMKSAG 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0071 498 MobiDBLite consensus disorder prediction 17 36 - -
Prci2g0071 498 ProSitePatterns EF-hand calcium-binding domain. 478 490 IPR018247 -
Prci2g0071 498 ProSitePatterns EF-hand calcium-binding domain. 407 419 IPR018247 -
Prci2g0071 498 FunFam calcium-dependent protein kinase 1 143 322 - -
Prci2g0071 498 Gene3D - 322 497 - -
Prci2g0071 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Prci2g0071 498 Gene3D Transferase(Phosphotransferase) domain 1 143 321 - -
Prci2g0071 498 Gene3D Phosphorylase Kinase; domain 1 59 142 - -
Prci2g0071 498 SUPERFAMILY Protein kinase-like (PK-like) 57 316 IPR011009 -
Prci2g0071 498 ProSiteProfiles EF-hand calcium-binding domain profile. 466 498 IPR002048 GO:0005509
Prci2g0071 498 ProSitePatterns EF-hand calcium-binding domain. 371 383 IPR018247 -
Prci2g0071 498 SMART efh_1 398 426 IPR002048 GO:0005509
Prci2g0071 498 SMART efh_1 362 390 IPR002048 GO:0005509
Prci2g0071 498 SMART efh_1 434 462 IPR002048 GO:0005509
Prci2g0071 498 SMART efh_1 469 497 IPR002048 GO:0005509
Prci2g0071 498 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0071 498 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Prci2g0071 498 FunFam Calcium-dependent protein kinase 1 323 498 - -
Prci2g0071 498 PANTHER SERINE/THREONINE-PROTEIN KINASE 55 490 - -
Prci2g0071 498 CDD STKc_CAMK 57 314 - -
Prci2g0071 498 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Prci2g0071 498 SUPERFAMILY EF-hand 354 494 IPR011992 -
Prci2g0071 498 ProSiteProfiles EF-hand calcium-binding domain profile. 358 393 IPR002048 GO:0005509
Prci2g0071 498 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0071 498 FunFam Calcium-dependent protein kinase 1 59 142 - -
Prci2g0071 498 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Prci2g0071 498 Pfam EF-hand domain pair 432 495 IPR002048 GO:0005509
Prci2g0071 498 Pfam EF-hand domain pair 363 423 IPR002048 GO:0005509
Prci2g0071 498 Pfam Protein kinase domain 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0071 Prci-Chr2 609759 614824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0071 36 497 EF-hand Containing Proteins AT3G20410 71.861 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci2g0071 Pkinase 6.5e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0071 K13412 - gmx:100816157 753.821