Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0056 ATGGGGGAACCTCAGTTGAAGTGTGTTACGCCTCCCGCCGCTCAACACCTGCTCTCCGATGTCTCCAATGTTGCTTTCTCCGAGTTGAACGATACTGTCCAGAGTTTGCCTTCGAACGCCGTCAAGGACTTGTTGTCCCAAGAGATATGTGCTCGCTGCATCTTTCGGCTCTTTGGAGTCCAAGGGCGCATCTATTCGTGCTTCTTGCTTTCATCATCAGCAATTAGTTCCATGATTGGAGGGCCAATTGATTTGGACAGTTTTACAATGGATAGTTGTTCTAGCAAATGTGAAAACTCAAGTAGTTACATGGAAACCAAATGTGATGCTAAACTATGCAGCCTTTGTTTAGGGATCCTGCAGTTCAGATTTTCCAGTGACACAAGGACTCTATTGAAAAAGGATACACCAGATGCTATGGCTGTCTTAATTGCCGACATGGTTAGGGAAGATGGCCATCAGATTGATAGCTTTTCCCTTGAAGTTTCAATACCACCTGTCATCCGTGAAAATGAGAGTGCAATCCAGTCATACATAAGAACGAAATATGGAGCTGAGCGTTGGTTCCAAGAAAAGTTACATTTTGGATGTGTGTCTACAAAGGATGCCTTAAAGTTTTCTATAGTTTATCCTCTTGAAAATCTTCTTGACTGTAAATCAAAGATGAACTCTTTCCGTATCCGTTTGACATATGATCATACTAACTCATCAAAAGAGGCTAGAAAGTGTTCAGATGGTGATAAGAGTTGCAAGAGAATAAAAACAGGTGTGGACAACAGAGTGGGTGTTGCCTATGATTCCATGGTTTCTCACCATGAATGCTTAGATTCTTTCAAGGCTGAATCCAATTTAGTTGGAGAAAATCCTTTCAACGGTTTGCTAGAAAATAAGTCCTCTGAGTCTCATGGAATGTTGCTAGAAAAGGTAATTGAACCTTGCCATTTTACAGTCTATTGCTACAGGGCACCCATCTATGTTGGTGGAAGATACCTGAAGTATTCACGGAATGTGAGTCAAACACGCTGGATAATTGATGATGAAAGAATGGGGGAAGCATCTGTCGAGGAAATAATTGGGGGAAACATCCTTCAGAAGTGCCATGGTGATAGCTACAAGTTTCATGCTGCTGGCAGAGAGGATATTGATGTCCGAATGTTGGGTCCAGGCAGGCCATTTCTTGTTGAGGTGCAAAATGCGCGACGTATCCCATCTGATCTGTTTGTAAACGATATAGAGAAATTGATAAATAACGTGGAAAATAAATTGGTTAGTGTGAAAAATCTGAAGTTGGTTGGTAACAATGGCTGGAATCTTATACATGAAGGAGAGGCAGAGAAACAGAAGCAATATGCTGCTTTAGTGTGGATTTCTCGTCCTCTGAATGATGAAGATTTGCAATCTATGTCCTCATTCAAGGATTTGAAAATATTGCAGAGGACACCGATAAGAGTGTTACATCGTCGCAGTCCTTTAGAGCGTGAAAAGATTATTCACTGGATGAAAATAGAAATGGTTGCTGGAAGTTCCCAGTATTTTCTTTTGCATTTGTGCACACAGGCTGGGACCTACATCAAGGAATTTGTGCATGGAGATCTTGGACGCACCCATCCTAGGTATGACCTTATCCATGTCTGTTCTCTCGAGTTATTTATGAAGACTTGGACAAAAGATCACGTGCAGGCTGTGTTTTATACGCTTTGTTTTGCAGTATCGTTCAATTTTGGGCTGTAG 1731 0.4165 MGEPQLKCVTPPAAQHLLSDVSNVAFSELNDTVQSLPSNAVKDLLSQEICARCIFRLFGVQGRIYSCFLLSSSAISSMIGGPIDLDSFTMDSCSSKCENSSSYMETKCDAKLCSLCLGILQFRFSSDTRTLLKKDTPDAMAVLIADMVREDGHQIDSFSLEVSIPPVIRENESAIQSYIRTKYGAERWFQEKLHFGCVSTKDALKFSIVYPLENLLDCKSKMNSFRIRLTYDHTNSSKEARKCSDGDKSCKRIKTGVDNRVGVAYDSMVSHHECLDSFKAESNLVGENPFNGLLENKSSESHGMLLEKVIEPCHFTVYCYRAPIYVGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQKCHGDSYKFHAAGREDIDVRMLGPGRPFLVEVQNARRIPSDLFVNDIEKLINNVENKLVSVKNLKLVGNNGWNLIHEGEAEKQKQYAALVWISRPLNDEDLQSMSSFKDLKILQRTPIRVLHRRSPLEREKIIHWMKIEMVAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPRYDLIHVCSLELFMKTWTKDHVQAVFYTLCFAVSFNFGL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0056 576 PANTHER UNCHARACTERIZED 30 539 IPR039894 -
Prci2g0056 576 Gene3D - 448 551 - -
Prci2g0056 576 SUPERFAMILY Pseudouridine synthase 435 535 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Prci2g0056 576 Gene3D - 323 447 - -
Prci2g0056 576 FunFam tRNA pseudouridine synthase Pus10 323 447 - -
Prci2g0056 576 FunFam tRNA pseudouridine synthase Pus10 448 550 - -
Prci2g0056 576 Coils Coil 408 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0056 Prci-Chr2 486466 496827 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0056 K07583 - gmx:100780683 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0056 2 486466 496827 Prci2g0056 2 486466 496827 ECH