Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0044 ATGGAGGAAATTGAAATTGATGCAAGAAGTGGATTCTGCAAATCCAACTCCATCTTCTACAGTAAACGGAAGCCTCTGCCGCTTCCTCAAAACTACTCCCTCGACGTCACCACTTTCATCTCCTCCCGCGTCCACCACGGCGAACTTGCTTTCATCGACGCCGCCACTGGTCGCCACTTCACCTTCCACCAACTCTGGCGGGCTGTCGATGCCGTCGCCACCTCTCTCTCTGACTTGGGTATTCGAAAGGGCCATGTCATCCTCCTCCTTTCCCCCAATTCCATTTTCTTTCCCGTCGTCTGCCTCGCCGTCATGTCCCTTGGGGCTATCATCACCACCACCAACCCTCTTAACACCACCCGCGAAATCTCCAAGCAAATCTCCGATTCAAAACCTTCCCTTGCCTTCACGACTCCGCCCCTACTAGCCAAAATTACCGCAATTTCAAATCTACCGATCGTTCTCATGGAGGAAGACACCGGCGCTCCCATCATAGAGCCTAAAATCGTGACCACGCTGGGCGAGATGATGAAGACGGAACTCCGTGCGAGCCAAGTCAGGGATCGAGTTTACCAAGACGATACTGCGACTTTACTGTATTCATCTGGTACCACCGGTCCAAGTAAAGGCGTGGTCTCGTCGCACCGGAATCTGATGGCAATGGTCCAGATAGTTTTGGGTCGATTCAATATGGATAAGGAGGAGACCTTCATATGCACCGTTCCTATGTTCCATATATATGGTCTGGTGGCGTTCGCAACTGGCCTTCTGGCTGCAGGATCGACGATAGTGGTGCTGTCCAAGTACGACATGGACGATATGCTATGGGCGATCCAGCAGTACCGTGCGACGTACCTGCCGCTGGTGCCGCCTATATTGGTGGCGATGATGAATCGAGCGGCTGCGATAAAGGCGAAGTACGACTTGAGCTCACTACATTCGGTGCTGTCTGGTGGGGCTCCACTGAGCAAGGAGGTGATAGAGGGCTTCGTGGACAATTTCCCGAACGTCACAATTCTCCAGGGTTACGGGTTGACCGAATCCACAGGAGTCGGGGCATCCACGGACTCACTCGAGGAGAGTCGGAGGTACGGCACGGCGGGGCTGTTGTCACCTGGCACCCAGGCCAAAGTCATTGACCCTGAAACTGGAGAGGCTTTGCCGGCTAATCGGACCGGTGAGCTCTGGCTCAGAGGTCCCACCGTCATGAAAGGTTATTTCAGTAACGAGGAAGCAACCACCTCAACCCTTGATTCAGAGGGATGGTTGAGGACTGGGGATATTTGCTACATTGATGGCGACGGATATATTTTCATTGTTGATAGGTTGAAAGAGCTTATTAAATACAAGGGATATCAGGTCCCACCAGCAGAACTAGAAGCCTTGTTGCTTGCTCATCCTGCAATTTCAGACGCTGCTGTCATACCATTCCCAGATAAGGAGGCTGGGCAGTATCCAATGGCATACGTAGTGAGGAAGAGTGGAAGCCATGTATCTGAAAAGGAAATTATGGATTTTGTGGCAGCACAGGTTGCTCCATATAAAAGAATTCGAAAGGTGGCATTTATTTCTTCAATACCAAAGAACCCATCCGGAAAAATCCTCAGGAAGGATCTCATCAAGCTCGCCACATCTAGACTTTGA 1644 0.5134 MEEIEIDARSGFCKSNSIFYSKRKPLPLPQNYSLDVTTFISSRVHHGELAFIDAATGRHFTFHQLWRAVDAVATSLSDLGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTTREISKQISDSKPSLAFTTPPLLAKITAISNLPIVLMEEDTGAPIIEPKIVTTLGEMMKTELRASQVRDRVYQDDTATLLYSSGTTGPSKGVVSSHRNLMAMVQIVLGRFNMDKEETFICTVPMFHIYGLVAFATGLLAAGSTIVVLSKYDMDDMLWAIQQYRATYLPLVPPILVAMMNRAAAIKAKYDLSSLHSVLSGGAPLSKEVIEGFVDNFPNVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPGTQAKVIDPETGEALPANRTGELWLRGPTVMKGYFSNEEATTSTLDSEGWLRTGDICYIDGDGYIFIVDRLKELIKYKGYQVPPAELEALLLAHPAISDAAVIPFPDKEAGQYPMAYVVRKSGSHVSEKEIMDFVAAQVAPYKRIRKVAFISSIPKNPSGKILRKDLIKLATSRL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0044 547 CDD 4CL 28 539 - -
Prci2g0044 547 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Prci2g0044 547 FunFam Long-chain-fatty-acid--CoA ligase FadD 20 444 - -
Prci2g0044 547 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Prci2g0044 547 Gene3D - 16 444 IPR042099 -
Prci2g0044 547 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Prci2g0044 547 SUPERFAMILY Acetyl-CoA synthetase-like 43 545 - -
Prci2g0044 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 541 - -
Prci2g0044 547 Pfam AMP-binding enzyme 44 449 IPR000873 -
Prci2g0044 547 Gene3D - 445 546 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0044 Prci-Chr2 385686 388542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0044 6 547 Monolignol Biosynthesis Gene Families AT1G20500 64.051 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0044 K10526 - qsa:O6P43_016337 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0044 2 385686 388542 Prci2g0044 2 385686 388542 ECH