Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g0043 | ATGGGCTGTTGTGTATCTTCGTTTTCCAAGGACTCTATTCCCCAAAGCAGTCCTCATTTGGATTATCAAAAGAACAACATCCTCAATCTTCCTTCCTCCTCCAACGGCGCTGATAATACCGCTGCTGCTGCTGACTTTCCACCGTTCTCGGAGTTCTCCCTCGCCGACCTCAAAGCTGCTACCAACAACTTCGGCCCCGATCACATCGTTTCCGAGAGCGGGGAGAAAGCCCCCAATGTCGTCTACAAAGGTCATTTTCAGAACCGTTCTATTGCCGTCAAGAAATTCACTAAATTGGCCTGGCCCGACCCTAAGCAGTTCGCGGATGAAGCTTTGGCTGTTGGAAAACTAAGACACAAGAGGCTTGCCAATTTGATTGGTTATTGTTGTGATGGGGATGAGAGACTTCTCGTTGCAGAGTACATGCCCAACGACACTCTCGCTAAACATCTATTTCATTGGGAGAATCAGACAATTGAGTGGGCCATGCGGTTAAGAGTTGCCTTGAACATTGCTGAAGCATTAGATTATTGTCATAGAGAAGGCCATCCGTTGTACCATGACTTGAATGCTTACAGGGTTCTCTTTGATGAGAATGGTGATCCCCGACTTTCATGTTTTGGTTTGATGAAGAATAGCAGGGATGGGAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAGTATCTGAGAAATGGGAGGGTGACCCCGGAAAGTGTCATCTTCAGCTTTGGAACTGTGCTATTGGATCTTCTAAGTGGAAAACATATCCCTCCAAGCCATGCTCTCGATATGATAAGGGGCAAGCATATCCTAATCCTTATGGATTCGCATTTGGAGGGAAAATTTTCAACTGACGAAGCAACTGTGGTTTTAGATCTAGCCTCACAATGTTTGCAGTATGAACCTCGGGAGCGGCCCAAGACTAGGGACCTTGTTTTCACACTCTCCCCACTACAAAATAAACCTGATGTTCCATCAAATGTAATGCTAGGCATTCCAAAACAAGAGGAAGCACCTCCTACTCTTCAGCATCCTTTGTCTCCAATGGGTGATGCCTGTTCTCGAAGGGACCTTACAGCTATCCATCAGATTCTGTTAATGGCCCACTACAGAGATGATGAAGGGACTAATGAGTTATCTTTCCAAGAGTGGACCCAGCAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGAGACTTGGCTTTTCGTGACAAGGATTTTAAAACTGCAATGGAGTGTTACTCCCAGTTCATCGAGGTGGGCACAATGGTATCCCCTACAGTGTATGCTCGGAGGAGTCTTTGCCATCTGATGTGTGATCAACCTGATGCTGCTCTAAGAGATGCAATGCAAGCGCAATGTGTGTATCCCGAGTGGTCCACAGCATTTTACATGCAGGCCGTTGCTCTTTCTAAATTAAACATGGACAAGGATGCTGCTGACATGCTCAATGAGGCTGCTGCCCTCGAAGACAAAAGACGGGGCAAAGGCTCTTCCTCTTGA | 1509 | 0.4639 | MGCCVSSFSKDSIPQSSPHLDYQKNNILNLPSSSNGADNTAAAADFPPFSEFSLADLKAATNNFGPDHIVSESGEKAPNVVYKGHFQNRSIAVKKFTKLAWPDPKQFADEALAVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALNIAEALDYCHREGHPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKHILILMDSHLEGKFSTDEATVVLDLASQCLQYEPRERPKTRDLVFTLSPLQNKPDVPSNVMLGIPKQEEAPPTLQHPLSPMGDACSRRDLTAIHQILLMAHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAMECYSQFIEVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPEWSTAFYMQAVALSKLNMDKDAADMLNEAAALEDKRRGKGSSS | 502 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g0043 | 502 | Coils | Coil | 474 | 494 | - | - | |
Prci2g0043 | 502 | SUPERFAMILY | TPR-like | 396 | 493 | IPR011990 | GO:0005515 | |
Prci2g0043 | 502 | FunFam | probable serine/threonine-protein kinase At4g35230 | 391 | 500 | - | - | |
Prci2g0043 | 502 | FunFam | probable serine/threonine-protein kinase At4g35230 | 39 | 141 | - | - | |
Prci2g0043 | 502 | Gene3D | Tetratricopeptide repeat domain | 391 | 498 | IPR011990 | GO:0005515 | |
Prci2g0043 | 502 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 32 | 496 | IPR045845 | GO:0004672|GO:0009742 | |
Prci2g0043 | 502 | Pfam | Protein kinase domain | 80 | 313 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g0043 | 502 | Gene3D | Phosphorylase Kinase; domain 1 | 39 | 141 | - | - | |
Prci2g0043 | 502 | ProSiteProfiles | Protein kinase domain profile. | 67 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci2g0043 | 502 | FunFam | probable serine/threonine-protein kinase At5g41260 | 143 | 334 | - | - | |
Prci2g0043 | 502 | Gene3D | Transferase(Phosphotransferase) domain 1 | 143 | 334 | - | - | |
Prci2g0043 | 502 | SUPERFAMILY | Protein kinase-like (PK-like) | 48 | 325 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g0043 | Prci-Chr2 | 377947 | 383660 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g0043 | 52 | 325 | Glycoside Hydrolase | AT3G07070 | 34.899 | 6.81e-43 | 155 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Prci2g0043 | Pkinase | 1.3e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g0043 | K14500 | - | cave:132190020 | 852.047 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci2g0043 | 2 | 377947 | 383660 | Prci2g0043 | 2 | 377947 | 383660 | ECH |