Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0043 ATGGGCTGTTGTGTATCTTCGTTTTCCAAGGACTCTATTCCCCAAAGCAGTCCTCATTTGGATTATCAAAAGAACAACATCCTCAATCTTCCTTCCTCCTCCAACGGCGCTGATAATACCGCTGCTGCTGCTGACTTTCCACCGTTCTCGGAGTTCTCCCTCGCCGACCTCAAAGCTGCTACCAACAACTTCGGCCCCGATCACATCGTTTCCGAGAGCGGGGAGAAAGCCCCCAATGTCGTCTACAAAGGTCATTTTCAGAACCGTTCTATTGCCGTCAAGAAATTCACTAAATTGGCCTGGCCCGACCCTAAGCAGTTCGCGGATGAAGCTTTGGCTGTTGGAAAACTAAGACACAAGAGGCTTGCCAATTTGATTGGTTATTGTTGTGATGGGGATGAGAGACTTCTCGTTGCAGAGTACATGCCCAACGACACTCTCGCTAAACATCTATTTCATTGGGAGAATCAGACAATTGAGTGGGCCATGCGGTTAAGAGTTGCCTTGAACATTGCTGAAGCATTAGATTATTGTCATAGAGAAGGCCATCCGTTGTACCATGACTTGAATGCTTACAGGGTTCTCTTTGATGAGAATGGTGATCCCCGACTTTCATGTTTTGGTTTGATGAAGAATAGCAGGGATGGGAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAGTATCTGAGAAATGGGAGGGTGACCCCGGAAAGTGTCATCTTCAGCTTTGGAACTGTGCTATTGGATCTTCTAAGTGGAAAACATATCCCTCCAAGCCATGCTCTCGATATGATAAGGGGCAAGCATATCCTAATCCTTATGGATTCGCATTTGGAGGGAAAATTTTCAACTGACGAAGCAACTGTGGTTTTAGATCTAGCCTCACAATGTTTGCAGTATGAACCTCGGGAGCGGCCCAAGACTAGGGACCTTGTTTTCACACTCTCCCCACTACAAAATAAACCTGATGTTCCATCAAATGTAATGCTAGGCATTCCAAAACAAGAGGAAGCACCTCCTACTCTTCAGCATCCTTTGTCTCCAATGGGTGATGCCTGTTCTCGAAGGGACCTTACAGCTATCCATCAGATTCTGTTAATGGCCCACTACAGAGATGATGAAGGGACTAATGAGTTATCTTTCCAAGAGTGGACCCAGCAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGAGACTTGGCTTTTCGTGACAAGGATTTTAAAACTGCAATGGAGTGTTACTCCCAGTTCATCGAGGTGGGCACAATGGTATCCCCTACAGTGTATGCTCGGAGGAGTCTTTGCCATCTGATGTGTGATCAACCTGATGCTGCTCTAAGAGATGCAATGCAAGCGCAATGTGTGTATCCCGAGTGGTCCACAGCATTTTACATGCAGGCCGTTGCTCTTTCTAAATTAAACATGGACAAGGATGCTGCTGACATGCTCAATGAGGCTGCTGCCCTCGAAGACAAAAGACGGGGCAAAGGCTCTTCCTCTTGA 1509 0.4639 MGCCVSSFSKDSIPQSSPHLDYQKNNILNLPSSSNGADNTAAAADFPPFSEFSLADLKAATNNFGPDHIVSESGEKAPNVVYKGHFQNRSIAVKKFTKLAWPDPKQFADEALAVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALNIAEALDYCHREGHPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKHILILMDSHLEGKFSTDEATVVLDLASQCLQYEPRERPKTRDLVFTLSPLQNKPDVPSNVMLGIPKQEEAPPTLQHPLSPMGDACSRRDLTAIHQILLMAHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAMECYSQFIEVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPEWSTAFYMQAVALSKLNMDKDAADMLNEAAALEDKRRGKGSSS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0043 502 Coils Coil 474 494 - -
Prci2g0043 502 SUPERFAMILY TPR-like 396 493 IPR011990 GO:0005515
Prci2g0043 502 FunFam probable serine/threonine-protein kinase At4g35230 391 500 - -
Prci2g0043 502 FunFam probable serine/threonine-protein kinase At4g35230 39 141 - -
Prci2g0043 502 Gene3D Tetratricopeptide repeat domain 391 498 IPR011990 GO:0005515
Prci2g0043 502 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 32 496 IPR045845 GO:0004672|GO:0009742
Prci2g0043 502 Pfam Protein kinase domain 80 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0043 502 Gene3D Phosphorylase Kinase; domain 1 39 141 - -
Prci2g0043 502 ProSiteProfiles Protein kinase domain profile. 67 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0043 502 FunFam probable serine/threonine-protein kinase At5g41260 143 334 - -
Prci2g0043 502 Gene3D Transferase(Phosphotransferase) domain 1 143 334 - -
Prci2g0043 502 SUPERFAMILY Protein kinase-like (PK-like) 48 325 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0043 Prci-Chr2 377947 383660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0043 52 325 Glycoside Hydrolase AT3G07070 34.899 6.81e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Prci2g0043 Pkinase 1.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0043 K14500 - cave:132190020 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0043 2 377947 383660 Prci2g0043 2 377947 383660 ECH