Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0038 ATGGAAGTCCGAATAATCTCCACCCACTGCATCAAACCCTCCCACCTGACTCCACAAGACCTCAAATCCCACAACCTCTCTCTCTTGGATCACTTCGTGCCTCCCATCTACATACCCATGATTCTGTTCTACACCGATGCTACCCTTGATGGCCACCACAGATTACATCTGCTGTGCCAATCCTTATCAGAAACCTTGACTCTCTTCTACCCCTTCGCCGGCACCATCAATGACAAGCTTTTCGTTGATTGTGACGACCGAGGCATTCCCTTTTCCGAGGCAAAGGCAAACTCTACTCTTGCCCACTTCTTCAACCAGCCCAATCTGGCATCATCCCTGCATAAACTTCTCCCCGTGCAACCGACTTGGGACGAATCAAGCCAAGGAGTTCACGTGGCCGCGATACGAGTGACCGCCTTTGAATGCGGTGCCTTAACCGTCGGCGCCATCGTGTCCCACATGATAGCCGATGGGGCTGCAACAAGCTTCTTTCTCAAAAGCTGGGCTGCCACGGCTCGTAAGGCTAATGATCACCACCCATCTCCTAATTTTGAGGCTCCGCCAGTAATATTCCCCGACAAGGCGGATGTATTACCCAAGCACGCAGGCATTATGGCTCTGTGTGGGCGCTTCATTAAAAGGGGCAAGACCGTCACAAGGAGACTCAGGTTCGGGGCGTCGGCAATGGCGAAGCTGACGGCCGAGGGGTCCAGCTCCAGAGTGCCGAATCCTACTCGAGTGGAGGTTGTATCCGCCCTTATCTGGAAGTCTATGACGGCGGCCTTGAAGAGCGACTCTGTTTTAATATCGCACGCGGTGAACATGCGGAGGAGGGCAGTTCCGGCATTTTCGGAAGGGTATATGGGTAATTTCCTGTGGGCAGCGCCAGCCTTAAGCAGGGGAGTTGAGCTTCTGCCCGAGCTGGTCATCAAAATTAGGGAATCAATAACAAAAATTGATGCTGACTTGGTGAAGAGCTTGCAAGGTGAAGGAGGGAGCGTCAGATACTGCGAGGCGCTTGGAGAGATGGCGGGTGAAGCTGCTGGTGGCGAGGCTTACGTGGGATATTCGAGTTGGTGCGGGTTTGGGCTCTATGACGTTGATTTTGGGTGGGGAAAACCAGCGTGGGTGGCTTGTACGGGGTCCACTGGCGACGAGGCCTTGTCCTTTAACGCCGTCGTTCTCGTGGACACACCTTCTGGCCACGGAATAGAAGCTTGGCTTTATTTGCCGCCCGATGACATGGCCATGTTAGAACAAGACAAGGACCTCCTTGCTTTCGCTACGTTAGATCCCCATCCTCTTGAAACCAACGCCCCTTCATTATACTAA 1332 0.533 MEVRIISTHCIKPSHLTPQDLKSHNLSLLDHFVPPIYIPMILFYTDATLDGHHRLHLLCQSLSETLTLFYPFAGTINDKLFVDCDDRGIPFSEAKANSTLAHFFNQPNLASSLHKLLPVQPTWDESSQGVHVAAIRVTAFECGALTVGAIVSHMIADGAATSFFLKSWAATARKANDHHPSPNFEAPPVIFPDKADVLPKHAGIMALCGRFIKRGKTVTRRLRFGASAMAKLTAEGSSSRVPNPTRVEVVSALIWKSMTAALKSDSVLISHAVNMRRRAVPAFSEGYMGNFLWAAPALSRGVELLPELVIKIRESITKIDADLVKSLQGEGGSVRYCEALGEMAGEAAGGEAYVGYSSWCGFGLYDVDFGWGKPAWVACTGSTGDEALSFNAVVLVDTPSGHGIEAWLYLPPDDMAMLEQDKDLLAFATLDPHPLETNAPSLY 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0038 443 Gene3D - 215 427 IPR023213 -
Prci2g0038 443 Gene3D - 1 200 IPR023213 -
Prci2g0038 443 Pfam Transferase family 1 423 - -
Prci2g0038 443 PANTHER F21J9.9 4 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0038 Prci-Chr2 330793 332280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0038 1 420 Monolignol Biosynthesis Gene Families AT5G48930 23.820 1.00e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0038 - - aprc:113870852 424.861