Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0034 ATGATTGAAAAGAAGGAGTTTCTCATCGTGGCGCCATTTGAGTGCGCATGGCGAAAGGATTTGAAATTCCGAGAAGCAGGTCGGGGTTGCGTGGTCTTCGAAGCTTTTGCGCGCAACGATATCACATTGGTTTTCCGGGAGAATGTGGGAAGCCGGCACTACCATTATAAAAGGGATAGCAGTCCCCACTATACCGTCATTTTGGGGAGCCACAGGAATAGAAGGCTGCGAATTGAGGTTGATGGAAAAGCTGTTGTTGATGTGGCTGGTGCTGAGCTTAGTTGCTCTTCATCATTCCAGAGTTATTGGATTAGCATCTACGATGGTTTGATTAGCATCGGTAAAGGAAAATACCCTTTCCAGAATATTCTCTTCCAGTGGCTGGATTCTAATCCTAATTATAGTGTTCAGTATATTGGTCTTTGCAGCTGGGACAAACACGTTGGATATAGAAATGTTAATGTGTTGTCGTTAACACACAATCACATGTCCCAGTGGAAGCACGTGAGTTTTGGTGAATATGAAGTTGTGGAGGAGGGTGACGAGGAGTTGGGAGACAAGCCGGTGGATTATGACAATTGGGGGCTGAAAAATTTTCTGGAGTGCTGGGAATTGTCCGACGTTTTATTCATTGTTGGTGCAGAGGAAAGACCTGTACCTGCTCATAAGGCCATTTTATCAACATCTGGGGATTTTCCTGTAGCCTCATCATTCTCTGTTATTTCGCTGCCCACAGTTACTTACCAAGTTTTTCACGCACTGCTGCAGTACATCTACGCTGGCTGGACCGAGATTCCTCTGGAACAACTTGGTTCCTTGAGGGCTCTAAGTTTACGATTTGAAGTGATGCCACTGGTTAAACAATGTGAGGAGACTATAGAACGGTTTAAGCTCAACCAGAAGTTTGTCTCGGGGAAGAATGTGGAGTTATCATTTCCAAGTACCAGGCCTCATTGTTGTTCAACTTTGCCCTCACTTCCTGTCAGCAGTCAGAGACTGAAACAGTTGCAATTAACTGGCCAGTACAGTGATGTAAACGTATATATTGAGGGTTATGGGCTTGTTGCCCAAGCACATAAAATTGTTCTCAGTTTATGGAGTATCCCATTTGCCAGGATGTTCACAAATGGAATGAGTGAAAGTATGTCTTCTGAGATTACTTTAAGGGATGTGCCACCAGAAGCTTTCAAAGCTATGTTTGACTTCTTATACAGTGGGAAACTAAATGATGAAGTTAATATAGATTCTGGTTCTTCGTTGCTGGAGCTGCTTTTATTGGCTGACCAATTTGGAGTGACTCTTCTTCACCAAGAGTGCTGTAAAATGCTTCTAGAATGCCTCTCAGAGGACTCATTATGCCCACTCCTTCAAGTGGTTTCTTCGATACCATCATGCAGACATATTAAAGAAACATGTCAGAGGAAATTCTCCATGAACTTCGACTATTGTACTAGTGCGAGCGCTGATGTTGTCATGTTAGACGATACAACTTTCAGCAATATAATTCAGCATCCAGATTTGACTGTTACATCTGAAGAGAAAGTTCTCAATGCAATCCTAATGTTTGGCATGAAAACTCAAGAGCTAGTTGCATGGGAAGTGGTGGATGAGTTGATGATAAATTCAAAACCTGAACTTCTTTTTGGTGAGAGGCTTCAGTTAGTTCATGGCTTGTTGCCATTTGTGAGATTTCCGCTACTTCCATATTCCTTGCTTAAAAAGTTGCAGAGTAGCAACATTAGCAGACACATTCTTGTGTTTCAAAATCTTGTTAATGAGGCTCTTAATTTTGTTGAAAGTGGACTGGCAAGCCCAGAAAATAAAGAAAATTTTAGATTCCTTCACAGACGATCTAGTTACAAAGAGCTCCAGTATATATGTGATGGAGACGGCAACGGAGTCTTATATTTTGCAGGCACATCATATGGAGAACACCAGTGGGTTAATCCTGTTTTGGCAAAGACAATTACCATCACGGCTAGCAGTCCCCACTCAAGATACACTGACCCGAAGGTGTTGGTCTCAAGAACTTACCAGGGAACATCTTTTGCAGGGCCTCGATTGGAAAACGGACATAATTGTGCCTGGTGGATGGTTGACCTTGGCCAAAATCATCAGCTTATGTGCAACTACTACACCTTGCGACAGGATGGCTCCAGGGCATTCATGAGATTTTGGAATTTCCAGGGCTCTCTCGATGGGAAGAGCTGGACGAATTTGAGAGTACATGAAAATGACGCGACGGTGAGCAAGCCTGGTCAATTTGCATCTTGGTCCATAACTGGGCCCAACGCTCTGCTTCCCTTCAAGTATTTCCGGGTTGTTCTAACGGCTCCCACCACTGATGCCACCAATCCTTGGAACTTGTGCATTTGTTACTTGGAGCTATATGGCTATTTCCTGTAG 2406 0.4343 MIEKKEFLIVAPFECAWRKDLKFREAGRGCVVFEAFARNDITLVFRENVGSRHYHYKRDSSPHYTVILGSHRNRRLRIEVDGKAVVDVAGAELSCSSSFQSYWISIYDGLISIGKGKYPFQNILFQWLDSNPNYSVQYIGLCSWDKHVGYRNVNVLSLTHNHMSQWKHVSFGEYEVVEEGDEELGDKPVDYDNWGLKNFLECWELSDVLFIVGAEERPVPAHKAILSTSGDFPVASSFSVISLPTVTYQVFHALLQYIYAGWTEIPLEQLGSLRALSLRFEVMPLVKQCEETIERFKLNQKFVSGKNVELSFPSTRPHCCSTLPSLPVSSQRLKQLQLTGQYSDVNVYIEGYGLVAQAHKIVLSLWSIPFARMFTNGMSESMSSEITLRDVPPEAFKAMFDFLYSGKLNDEVNIDSGSSLLELLLLADQFGVTLLHQECCKMLLECLSEDSLCPLLQVVSSIPSCRHIKETCQRKFSMNFDYCTSASADVVMLDDTTFSNIIQHPDLTVTSEEKVLNAILMFGMKTQELVAWEVVDELMINSKPELLFGERLQLVHGLLPFVRFPLLPYSLLKKLQSSNISRHILVFQNLVNEALNFVESGLASPENKENFRFLHRRSSYKELQYICDGDGNGVLYFAGTSYGEHQWVNPVLAKTITITASSPHSRYTDPKVLVSRTYQGTSFAGPRLENGHNCAWWMVDLGQNHQLMCNYYTLRQDGSRAFMRFWNFQGSLDGKSWTNLRVHENDATVSKPGQFASWSITGPNALLPFKYFRVVLTAPTTDATNPWNLCICYLELYGYFL 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0034 801 Gene3D Potassium Channel Kv1.1; Chain A 318 477 IPR011333 -
Prci2g0034 801 Pfam F5/8 type C domain 657 790 IPR000421 -
Prci2g0034 801 PANTHER OS05G0345500 PROTEIN 3 801 - -
Prci2g0034 801 Gene3D Potassium Channel Kv1.1; Chain A 194 308 IPR011333 -
Prci2g0034 801 ProSiteProfiles BTB domain profile. 206 267 IPR000210 GO:0005515
Prci2g0034 801 Gene3D - 478 598 - -
Prci2g0034 801 SUPERFAMILY POZ domain 196 293 IPR011333 -
Prci2g0034 801 SUPERFAMILY Galactose-binding domain-like 645 800 IPR008979 -
Prci2g0034 801 ProSiteProfiles BTB domain profile. 343 412 IPR000210 GO:0005515
Prci2g0034 801 Pfam BTB/POZ domain 196 294 IPR000210 GO:0005515
Prci2g0034 801 Pfam BTB/POZ domain 333 445 IPR000210 GO:0005515
Prci2g0034 801 CDD BTB_POZ_ZBTB_KLHL-like 342 413 - -
Prci2g0034 801 SMART BACK_2 453 576 IPR011705 -
Prci2g0034 801 Pfam Farnesoic acid 0-methyl transferase 52 148 IPR022041 -
Prci2g0034 801 SUPERFAMILY POZ domain 330 444 IPR011333 -
Prci2g0034 801 Gene3D - 651 799 - -
Prci2g0034 801 Pfam BTB And C-terminal Kelch 459 526 IPR011705 -
Prci2g0034 801 SMART BTB_4 206 297 IPR000210 GO:0005515
Prci2g0034 801 SMART BTB_4 343 447 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0034 Prci-Chr2 306228 312647 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0034 - - gmx:100810794 1281.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0034 2 306228 312647 Prci2g0034 2 306228 312647 ECH