Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0025 ATGAGCTGCTTCTCTTGCATTAGTCATCGTCGCACAGATGCCAGCAGAGTCCAAATTGATAATGCTCTTCGATCTACCTCTTCTTCCGGGGCTGGGCGGTCTAAGTCTCATGCCCACAATGACGACGACGGAAGCAAGGGAGGATCCTCAGACGAGAATGGGAAGAACGGCGTCTCCGTCAGCCCCAAAAGCAGCGCAGCTCGTAGTTTCACTTTCCGTGAACTTGCAGCTGCAACCAGGGGTTTCAAGCACGTGAATTTGATTGGGGAAGGAGGTTTCGGAAGGGTTTACAAAGGACGTCTTGAAACAGGCCAGCTTGTTGCTGTCAAACAATTAAATCACGATGGTCATCAAGGTTTTCAGGAATTCATAGTGGAGGTTCTCATGTTAAGCCTTCTACACCATTCTAATCTTGTCACCTTGTTTGGTTACTGCACCGATGGGGATCAAAGGCTTTTGGTTTACGAATATATGCCTATGGGTAGCGTGGAAGATCATCTTTTCGATTTGAAACTAAATCAAGAGCTGCTAAGTTGGAATGATCGGATGAAGATTGCTGTTGGAGCTGCCCGAGGGCTTGAGTACCTTCATTGTAAAGCAAATCCACCTGTTATCTATAGGGACTTGAAATCTGCGAACATATTATTAGATGATAACTTCAACCCAAAACTCTCAGATTTTGGGCTTGCTAAACTTGGTCCTGTTGGGGATAATACTCACGTTTCAACTAGAGTGATGGGAACATATGGTTACTGTGCCCCAGAGTATGCCATGAGTGGCAAATTGACTCTTAAATCTGATATCTATAGCTTTGGTGTGGTTTTGATGGAGTTGATTACTGGACGAAGGGCAATAGATGTCAGTAAGAAACCAGGGGAGCAAAACTTAGTTGCATGGTCTCGACAGTTTCTCAAGGATCGGAGAAAGTTTGTACAGCTGGTTGATCCTCGTCTTGAAGGACAATTCCCCTTGCGCTGTTTGCATCATGCGATTGCTATCACTGCAATGTGCCTCCAAGAGCAACCAAATTTCCGCCCACTTATCGGTGACATTGTTGTTGCACTGGAATACTTGCACTCGCAAAGTAAAGCCTCGGAAGTCCATAAAGGTGGGGAGCAATGTCTGTCATCTCGACCACCGTCACAACTGGACAAATGTTGTTTGGTGGAATCAAATTCTAGATTGAGATTGCTTAATCGCAACGGACATGGAATCTATTCCTGTACAGGCGTAATCATTCATGGGTAA 1248 0.4527 MSCFSCISHRRTDASRVQIDNALRSTSSSGAGRSKSHAHNDDDGSKGGSSDENGKNGVSVSPKSSAARSFTFRELAAATRGFKHVNLIGEGGFGRVYKGRLETGQLVAVKQLNHDGHQGFQEFIVEVLMLSLLHHSNLVTLFGYCTDGDQRLLVYEYMPMGSVEDHLFDLKLNQELLSWNDRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDDNFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLMELITGRRAIDVSKKPGEQNLVAWSRQFLKDRRKFVQLVDPRLEGQFPLRCLHHAIAITAMCLQEQPNFRPLIGDIVVALEYLHSQSKASEVHKGGEQCLSSRPPSQLDKCCLVESNSRLRLLNRNGHGIYSCTGVIIHG 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0025 415 PANTHER OS07G0668900 PROTEIN 3 365 - -
Prci2g0025 415 SMART serkin_6 82 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0025 415 ProSiteProfiles Protein kinase domain profile. 82 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0025 415 MobiDBLite consensus disorder prediction 23 63 - -
Prci2g0025 415 CDD STKc_IRAK 88 356 - -
Prci2g0025 415 FunFam probable serine/threonine-protein kinase RLCKVII 54 157 - -
Prci2g0025 415 Gene3D Phosphorylase Kinase; domain 1 54 157 - -
Prci2g0025 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Prci2g0025 415 SUPERFAMILY Protein kinase-like (PK-like) 56 357 IPR011009 -
Prci2g0025 415 FunFam Serine/threonine-protein kinase PBS1 158 373 - -
Prci2g0025 415 MobiDBLite consensus disorder prediction 35 49 - -
Prci2g0025 415 Gene3D Transferase(Phosphotransferase) domain 1 158 377 - -
Prci2g0025 415 Pfam Protein kinase domain 83 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g0025 415 ProSitePatterns Protein kinases ATP-binding region signature. 88 110 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0025 Prci-Chr2 236751 240541 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0025 1 365 Glycoside Hydrolase AT3G07070 57.838 9.56e-151 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci2g0025 Pkinase 6.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0025 - - mnt:21407579 588.956