Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci298g0007 ATGCAAGGTAACAGAAGGACTCTTGGCTCCTTTCCAGCGATTGTAAGTATGTTGCAGGAGCCTAGTTCTAGTGGCTCTGATATGGATCCGCAGACTTCCTTGAATCACATGCAAAATCCAGTTGATGCTCGGCTGTCAGATTTTCTGGGATCCTCTGGTGAGAATGCATGTTTATGCACTAGTGATCCTGATGTTCAGAACTTTGGTGGATGGAATGCTGGTGAACCTAGTTCTAGTGTGAATCTTCATAGTCAAGTCAATAATGATGGGCTAAAAGCTGAACATGGTTGGTCTTCTTCATGTGGTGTTTCTACTGAGGATGTTCTAAGAACAGAAGAACGGCAGTTTGATCCAAATAATGTAACTTTCCCTGGCAGCTCAAATACTGACTTACGTGGAAATCAATCCAGAGTTCAGCCTTTCTTCTTGCAAGGTTCCAGCTCCAATCATAGAACCCAGAATGCGGCTTTAAATATGGGTTCCATTGCCAGCCCTGCTAATCATGGGAAAGGAACAGAACCTTGTAGCAGTGATAGTATTCACAATACATATGGATTCACTAGTAAGCATACATCATTTGGTAGTGCTTCCTGTGATCATGTAGGAACTTCATCTGGAAGCTCTGGTTACATTGTTGGGGGAGATAATGATAATTCAAGCTCTTCTTTAGTTAATTGGGGTTCTTCCTGCAAGAGAAAGGCTCTTGAAAGTACTTCTGGGCAGCTGTGTACTGGAGGAAGTTCAAGCTCTTTTCTAGAAGCTGAAAGCAGTTGCTGGCCTACTGGGACTTTCAATTCTAATAATGCTTCCAGCAGTTTAAATGTGTCTAGACCTTCTGAGGATGTTCTTGTTACTAATCCTCCAGTAGAGCAGGACCCAAGAAATGAGATGAGGCAACTAGCTTCTGATGCATTCCCTTTGATAGGAGTTATGGGAAATGTGAACAGGCCCTTGAGAAACTTTGACAGGAGGATGAATTATCCACAACGACAGGAATCTAGGCATTCTAATCATTCTTCTTCCCGCCAAAGACCTACCTCTCACCCATTTAATGATTCTCTAGAGCTAAGGTTAACAGCTGGAGTTACAGCAGCCAGTTCTGGCGCTCCTCAGTGTCAGTCACATTTTACGCACATCCCTGGTTTGCCAGGGAACACACATCCTTTTCCTTGGAGTGGAGCTTCTAGTTCAAGAGGAGCCGGTTCATCTACTTCTTATAACTCTGCAGAAAGGGAAGTTCGTGAAGAATTGAACTTTAGAATTTTTCCAAGAGACAATACAGAGCACCCCATCCTTGCACCTTCATCTTCTGGACTTGATCCTACAAGTTGGCATGTATCATCTGGTAATGTGAACAATTCTGGAAGTGTACCTCCTGCATCTTGGATTGGACCCAGTTCAAGTGTCAATTCATTAACTAATCCGAGCTGGATTGTTCCCCATGAAGTTCCAACACAGAGCCAGCAAAGATTATCAGAGTTCAGTCCCTGGTCCTTTTTTCCATCAATGAACTCAGTATCTGGCGTTCATAATGTTCATTCTGCCTCATCTTCTACTTCTTCCGGCCCTCCTTCCTTTATTCCAGACATGGGCAACCATCAATCATATCCAAGATTAGCATCATTGATGGAGAGAAGAGGTGATGAAGTTCTTAATGCACCCCATTCATTGCGGGCTTTAGCTGTTGACATTGAGGGGAGACGACGATTGATATCTGAGATTCGCCAAGTCTTAAGTGCAATGCGCAGGGGTGAGAACTTACGAGCTGAGGATTATATGCTCTTTGACCCGTTCATATATCATGGTATGGCTGAACTTCATGATAGGCACAGGGACATGCGCCTTGATGTTGATAACATGTCTTATGAGGAATTGCTGGCATTGGAGGAGCGCATTGGAGATGTGAGCACTGGATTGAGTGAGGATACCATTATGAAGTTGATGAAACATCGGATCTACGTGTCTGTAATGGCCGAGCCTTCAACAGATCTCGAACCTTGTTGTATCTGTCAGGAGGAATACACTGATGGGGAGGATGTAGCCTCACTAGATTGTGAACATGAATTCCACACCAACTGCATCAAGAAGTGGCTAAAGCAGAAGAACCTGTGCCCCATTTGCAAAACAACGGCCTTAGCAACATGA 2145 0.4396 MQGNRRTLGSFPAIVSMLQEPSSSGSDMDPQTSLNHMQNPVDARLSDFLGSSGENACLCTSDPDVQNFGGWNAGEPSSSVNLHSQVNNDGLKAEHGWSSSCGVSTEDVLRTEERQFDPNNVTFPGSSNTDLRGNQSRVQPFFLQGSSSNHRTQNAALNMGSIASPANHGKGTEPCSSDSIHNTYGFTSKHTSFGSASCDHVGTSSGSSGYIVGGDNDNSSSSLVNWGSSCKRKALESTSGQLCTGGSSSSFLEAESSCWPTGTFNSNNASSSLNVSRPSEDVLVTNPPVEQDPRNEMRQLASDAFPLIGVMGNVNRPLRNFDRRMNYPQRQESRHSNHSSSRQRPTSHPFNDSLELRLTAGVTAASSGAPQCQSHFTHIPGLPGNTHPFPWSGASSSRGAGSSTSYNSAEREVREELNFRIFPRDNTEHPILAPSSSGLDPTSWHVSSGNVNNSGSVPPASWIGPSSSVNSLTNPSWIVPHEVPTQSQQRLSEFSPWSFFPSMNSVSGVHNVHSASSSTSSGPPSFIPDMGNHQSYPRLASLMERRGDEVLNAPHSLRALAVDIEGRRRLISEIRQVLSAMRRGENLRAEDYMLFDPFIYHGMAELHDRHRDMRLDVDNMSYEELLALEERIGDVSTGLSEDTIMKLMKHRIYVSVMAEPSTDLEPCCICQEEYTDGEDVASLDCEHEFHTNCIKKWLKQKNLCPICKTTALAT 714
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci298g0007 714 MobiDBLite consensus disorder prediction 389 408 - -
Prci298g0007 714 FunFam E3 ubiquitin-protein ligase MBR2 634 712 - -
Prci298g0007 714 MobiDBLite consensus disorder prediction 328 351 - -
Prci298g0007 714 SMART ring_2 667 707 IPR001841 -
Prci298g0007 714 MobiDBLite consensus disorder prediction 365 380 - -
Prci298g0007 714 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 629 712 IPR013083 -
Prci298g0007 714 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 226 712 IPR045191 GO:0061630
Prci298g0007 714 Pfam Ring finger domain 667 708 IPR001841 -
Prci298g0007 714 SUPERFAMILY RING/U-box 649 711 - -
Prci298g0007 714 MobiDBLite consensus disorder prediction 365 410 - -
Prci298g0007 714 MobiDBLite consensus disorder prediction 432 451 - -
Prci298g0007 714 ProSiteProfiles Zinc finger RING-type profile. 667 708 IPR001841 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci298g0007 31 714 C3H Transcription Factor Family AT2G15530 37.115 1.13e-114 359
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci298g0007 - K19041 gmx:100809024 900.968