Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci298g0007 | ATGCAAGGTAACAGAAGGACTCTTGGCTCCTTTCCAGCGATTGTAAGTATGTTGCAGGAGCCTAGTTCTAGTGGCTCTGATATGGATCCGCAGACTTCCTTGAATCACATGCAAAATCCAGTTGATGCTCGGCTGTCAGATTTTCTGGGATCCTCTGGTGAGAATGCATGTTTATGCACTAGTGATCCTGATGTTCAGAACTTTGGTGGATGGAATGCTGGTGAACCTAGTTCTAGTGTGAATCTTCATAGTCAAGTCAATAATGATGGGCTAAAAGCTGAACATGGTTGGTCTTCTTCATGTGGTGTTTCTACTGAGGATGTTCTAAGAACAGAAGAACGGCAGTTTGATCCAAATAATGTAACTTTCCCTGGCAGCTCAAATACTGACTTACGTGGAAATCAATCCAGAGTTCAGCCTTTCTTCTTGCAAGGTTCCAGCTCCAATCATAGAACCCAGAATGCGGCTTTAAATATGGGTTCCATTGCCAGCCCTGCTAATCATGGGAAAGGAACAGAACCTTGTAGCAGTGATAGTATTCACAATACATATGGATTCACTAGTAAGCATACATCATTTGGTAGTGCTTCCTGTGATCATGTAGGAACTTCATCTGGAAGCTCTGGTTACATTGTTGGGGGAGATAATGATAATTCAAGCTCTTCTTTAGTTAATTGGGGTTCTTCCTGCAAGAGAAAGGCTCTTGAAAGTACTTCTGGGCAGCTGTGTACTGGAGGAAGTTCAAGCTCTTTTCTAGAAGCTGAAAGCAGTTGCTGGCCTACTGGGACTTTCAATTCTAATAATGCTTCCAGCAGTTTAAATGTGTCTAGACCTTCTGAGGATGTTCTTGTTACTAATCCTCCAGTAGAGCAGGACCCAAGAAATGAGATGAGGCAACTAGCTTCTGATGCATTCCCTTTGATAGGAGTTATGGGAAATGTGAACAGGCCCTTGAGAAACTTTGACAGGAGGATGAATTATCCACAACGACAGGAATCTAGGCATTCTAATCATTCTTCTTCCCGCCAAAGACCTACCTCTCACCCATTTAATGATTCTCTAGAGCTAAGGTTAACAGCTGGAGTTACAGCAGCCAGTTCTGGCGCTCCTCAGTGTCAGTCACATTTTACGCACATCCCTGGTTTGCCAGGGAACACACATCCTTTTCCTTGGAGTGGAGCTTCTAGTTCAAGAGGAGCCGGTTCATCTACTTCTTATAACTCTGCAGAAAGGGAAGTTCGTGAAGAATTGAACTTTAGAATTTTTCCAAGAGACAATACAGAGCACCCCATCCTTGCACCTTCATCTTCTGGACTTGATCCTACAAGTTGGCATGTATCATCTGGTAATGTGAACAATTCTGGAAGTGTACCTCCTGCATCTTGGATTGGACCCAGTTCAAGTGTCAATTCATTAACTAATCCGAGCTGGATTGTTCCCCATGAAGTTCCAACACAGAGCCAGCAAAGATTATCAGAGTTCAGTCCCTGGTCCTTTTTTCCATCAATGAACTCAGTATCTGGCGTTCATAATGTTCATTCTGCCTCATCTTCTACTTCTTCCGGCCCTCCTTCCTTTATTCCAGACATGGGCAACCATCAATCATATCCAAGATTAGCATCATTGATGGAGAGAAGAGGTGATGAAGTTCTTAATGCACCCCATTCATTGCGGGCTTTAGCTGTTGACATTGAGGGGAGACGACGATTGATATCTGAGATTCGCCAAGTCTTAAGTGCAATGCGCAGGGGTGAGAACTTACGAGCTGAGGATTATATGCTCTTTGACCCGTTCATATATCATGGTATGGCTGAACTTCATGATAGGCACAGGGACATGCGCCTTGATGTTGATAACATGTCTTATGAGGAATTGCTGGCATTGGAGGAGCGCATTGGAGATGTGAGCACTGGATTGAGTGAGGATACCATTATGAAGTTGATGAAACATCGGATCTACGTGTCTGTAATGGCCGAGCCTTCAACAGATCTCGAACCTTGTTGTATCTGTCAGGAGGAATACACTGATGGGGAGGATGTAGCCTCACTAGATTGTGAACATGAATTCCACACCAACTGCATCAAGAAGTGGCTAAAGCAGAAGAACCTGTGCCCCATTTGCAAAACAACGGCCTTAGCAACATGA | 2145 | 0.4396 | MQGNRRTLGSFPAIVSMLQEPSSSGSDMDPQTSLNHMQNPVDARLSDFLGSSGENACLCTSDPDVQNFGGWNAGEPSSSVNLHSQVNNDGLKAEHGWSSSCGVSTEDVLRTEERQFDPNNVTFPGSSNTDLRGNQSRVQPFFLQGSSSNHRTQNAALNMGSIASPANHGKGTEPCSSDSIHNTYGFTSKHTSFGSASCDHVGTSSGSSGYIVGGDNDNSSSSLVNWGSSCKRKALESTSGQLCTGGSSSSFLEAESSCWPTGTFNSNNASSSLNVSRPSEDVLVTNPPVEQDPRNEMRQLASDAFPLIGVMGNVNRPLRNFDRRMNYPQRQESRHSNHSSSRQRPTSHPFNDSLELRLTAGVTAASSGAPQCQSHFTHIPGLPGNTHPFPWSGASSSRGAGSSTSYNSAEREVREELNFRIFPRDNTEHPILAPSSSGLDPTSWHVSSGNVNNSGSVPPASWIGPSSSVNSLTNPSWIVPHEVPTQSQQRLSEFSPWSFFPSMNSVSGVHNVHSASSSTSSGPPSFIPDMGNHQSYPRLASLMERRGDEVLNAPHSLRALAVDIEGRRRLISEIRQVLSAMRRGENLRAEDYMLFDPFIYHGMAELHDRHRDMRLDVDNMSYEELLALEERIGDVSTGLSEDTIMKLMKHRIYVSVMAEPSTDLEPCCICQEEYTDGEDVASLDCEHEFHTNCIKKWLKQKNLCPICKTTALAT | 714 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci298g0007 | 714 | MobiDBLite | consensus disorder prediction | 389 | 408 | - | - | |
Prci298g0007 | 714 | FunFam | E3 ubiquitin-protein ligase MBR2 | 634 | 712 | - | - | |
Prci298g0007 | 714 | MobiDBLite | consensus disorder prediction | 328 | 351 | - | - | |
Prci298g0007 | 714 | SMART | ring_2 | 667 | 707 | IPR001841 | - | |
Prci298g0007 | 714 | MobiDBLite | consensus disorder prediction | 365 | 380 | - | - | |
Prci298g0007 | 714 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 629 | 712 | IPR013083 | - | |
Prci298g0007 | 714 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 226 | 712 | IPR045191 | GO:0061630 | |
Prci298g0007 | 714 | Pfam | Ring finger domain | 667 | 708 | IPR001841 | - | |
Prci298g0007 | 714 | SUPERFAMILY | RING/U-box | 649 | 711 | - | - | |
Prci298g0007 | 714 | MobiDBLite | consensus disorder prediction | 365 | 410 | - | - | |
Prci298g0007 | 714 | MobiDBLite | consensus disorder prediction | 432 | 451 | - | - | |
Prci298g0007 | 714 | ProSiteProfiles | Zinc finger RING-type profile. | 667 | 708 | IPR001841 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci298g0007 | 31 | 714 | C3H Transcription Factor Family | AT2G15530 | 37.115 | 1.13e-114 | 359 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci298g0007 | - | K19041 | gmx:100809024 | 900.968 |