Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci28g0009 ATGAGCGTGGTTGGTTTTGACTTGGGTAATGAGAGCTGTATTGTTGCTGTTGCAAGGCAGAGAGGAATTGATGTCGTGCTCAATGATGAGTCCAAACGAGAAACTCCAGCAGTTGTATGTTTTGGTGACAAACAACGGTTTATTGGAACAGCAGGGGCGTCATCTACTATGATGAACCCAAAGAATTCAATCTCCCAGATCAAGCGACTGATTGGTAGACAATTCTCTGATCCAGAGTTGCAGCAGGACTTGAAGTTGTTGCCTTTTGTGGTAACTGAAGGGCCTGATGGTTATCCATTAATACATGCACGGTATTTGGGTGAAAATAAGACATTTACACCAACACAAGTTTTGGGAATGGTGTTGTCAAATCTCAAAGGCATAGCTGAGAAAAATCTCAGTGCAGCTGTTGTTGATTGTTGCATCGGAATTCCAGTTTATTTCACTGATATTCAGAGAAGAGCAGTCTTGGATGCAGCTACCATTGCGGGTTTGCGCCCACTTCGCCTGATTCATGAAACGACAGCAACTGCCTTGGCTTATGGAATTTATAAGACTGATCTCCCTGAAAATGATCAACTGAATGTTGCATTTGTTGACGTTGGACATTCCAGCATGCAGGTGTGCATTGCTGGCTTTAAGAAGGGGCAGCTGAAAGTTTTGGCTCATTCATTTGATAGATCTCTGGGTGGTAGGGATTTTGATGAAGTTTTGTTCCAACACTTTGCCGCAAAGTTCAGGGAAGAGTACAAGATTGATGTTTTCCAGAATGCCAGAGCTTGTCTAAGGCTGAGAGCTGCTTGCGAGAAGCTGAAGAAGATGCTCAGTGCAAATCCTGAAGCACCTCTTAACATTGAGTGCTTAATGGATGAGAAAGATGTTAGGGGCTTCATCAAGCGTGATGAATTTGAGAAATTAAGTGTTCCAATATTGGAACGTGTTAAAAAACCTTTGGAGAATGCCCTTGCAGAAGCAGGTCTTACAGTTGAGAATGTTCATATGGTTGAGGTAATTGGTTCAGGTTCTCGTGTACCAGCTATAAACAAGATATTGACAGAGTTTTTCAAGAAGGAGCCTAGGCGGACAATGAATGCAAGTGAGTGTGTTGCCAAGGGTTGTGCCTTGCAATGTGCTATTCTTAGTCCAACATTTAAAGTACGAGAGTTTCAGGTCAACGAAAGCTTTCCTTTCCCAATTTCTCTGTCATGGAAAGGCTCTGGTCCAGACCAACAGGAGAGTGGACCAGATAATCAGATGAGTACTGTTGTTTTCTCTAAAGGAAATGTCATACCAAGCATCAAGGCTCTGACATTCTATAGGTCAGAAACCTTTTCTGTTGATGTACAATATGCTGATATGAGTGAGCTGCAAGCACCTCCAAAGATCAGCACATATACTATTGGCCCTTTCCCACCTACAAAAGTTGAGAAGGCAAAAGTTAAAGTGAAAGTACGATTGAATCTGCATGGAGTTGCATCTGTTGAGTCAGCAACTCTCCTGGAGGAGGAGGAAGTTGAGGTTCCAGTGGTCAAAGTACCATCTGGAGAACGTGCCAAGATGGACACTGATGAAACTCCTGCTGAGGCTGCAGCAGAGGCTGCTGCAGCACCTCCAAGCTCCAATGATGCGGATGTTGATATGCAAGATGCCAAGGCAGCTGTTGACACCCCTGGGATGGAAAATGGCAAGCCTGAGACTGGAGATAAGCCTGTGCAGATGGATACTGATATCAAGGTTGAGGCTCCAAAGAAAAAGGTCAGGAAAACAAACATACATGTGACAGAGTTGGTCTATGGAGCAATGAGTCATTCAGATGTCCAGAAAGCCATAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAAGAAACAAAAGAAAAGAAAAATGCAGTCGAAGCTTATGTTTATGACATGAGGAACAAGCTCAGTGACAAATACCAAGAGTTTGTCACTGATTCAGAGAGAGAGGCACTTACTGCTAGACTTCAGGAGGTGGAAGACTGGTTATATGAAGATGGTGAGGATGAAACTAAAGGTGTTTATGTTGCCAAACTCGAGGAACTTAAGAAGCAAGGTGATCCAATTGAAGAGCGTTACAAGGAATACATGGAGAGGGGCACAGTAATCAGTCAGTTGATCTATTGTATAAATAGCTACAGGGAAGCTGCAATGTCAAACGATCCCAAATTTGATCACATTGACATTTCTGAGAAACAGAAGGTTCTGAATGAATGTGTTGAAGCTGAGGCTTGGCTTAGGGAGAAAAAGCAGCACCAGGACTCTCTTCCAAAACATGCTACCCCTGTACTCTTGTCAGCTGAAGTAAGAAAGAAAGCTGAGGCGGTTAATAGATTCTGTAAGCCAATTATGACAAAACCGAGACCAGCCAAACCAGCTACTCCTGAAGCGACAGGTACCCCGCCGCCTCCTTCTCCGGGTAGTGAGCAGCAGCAACCTCAGGAAGATGGTGACGCGAGCGACAATGCAGACCAGGCCCCACCAGCACCTACTGAACCGATGGAGACTGACAAGTCAGAAAATTCAGGCACTGCGTAA 2562 0.4422 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGASSTMMNPKNSISQIKRLIGRQFSDPELQQDLKLLPFVVTEGPDGYPLIHARYLGENKTFTPTQVLGMVLSNLKGIAEKNLSAAVVDCCIGIPVYFTDIQRRAVLDAATIAGLRPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHSSMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFQHFAAKFREEYKIDVFQNARACLRLRAACEKLKKMLSANPEAPLNIECLMDEKDVRGFIKRDEFEKLSVPILERVKKPLENALAEAGLTVENVHMVEVIGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNESFPFPISLSWKGSGPDQQESGPDNQMSTVVFSKGNVIPSIKALTFYRSETFSVDVQYADMSELQAPPKISTYTIGPFPPTKVEKAKVKVKVRLNLHGVASVESATLLEEEEVEVPVVKVPSGERAKMDTDETPAEAAAEAAAAPPSSNDADVDMQDAKAAVDTPGMENGKPETGDKPVQMDTDIKVEAPKKKVRKTNIHVTELVYGAMSHSDVQKAIEKEFEMALQDRVMEETKEKKNAVEAYVYDMRNKLSDKYQEFVTDSEREALTARLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEYMERGTVISQLIYCINSYREAAMSNDPKFDHIDISEKQKVLNECVEAEAWLREKKQHQDSLPKHATPVLLSAEVRKKAEAVNRFCKPIMTKPRPAKPATPEATGTPPPPSPGSEQQQPQEDGDASDNADQAPPAPTEPMETDKSENSGTA 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci28g0009 853 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 717 799 IPR029048 -
Prci28g0009 853 Gene3D - 5 374 - -
Prci28g0009 853 Gene3D - 601 711 IPR029048 -
Prci28g0009 853 FunFam Heat shock 70 kDa protein 4 230 313 - -
Prci28g0009 853 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 603 701 IPR029048 -
Prci28g0009 853 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 634 IPR029047 -
Prci28g0009 853 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Prci28g0009 853 Gene3D - 186 360 - -
Prci28g0009 853 FunFam Heat shock 70 kDa protein 4 38 113 - -
Prci28g0009 853 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 599 IPR029047 -
Prci28g0009 853 CDD HSPA4_like_NDB 2 381 - -
Prci28g0009 853 Gene3D - 38 113 - -
Prci28g0009 853 PANTHER HSC70CB, ISOFORM G-RELATED 1 845 - -
Prci28g0009 853 MobiDBLite consensus disorder prediction 786 853 - -
Prci28g0009 853 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Prci28g0009 853 FunFam Heat shock 70 kDa protein 4 107 222 - -
Prci28g0009 853 FunFam Heat shock 70 kDa protein 14 387 599 - -
Prci28g0009 853 FunFam Heat shock 70 kDa protein 4 601 711 - -
Prci28g0009 853 Gene3D Actin; Chain A, domain 4 230 313 - -
Prci28g0009 853 MobiDBLite consensus disorder prediction 515 546 - -
Prci28g0009 853 PRINTS 70kDa heat shock protein signature 2 15 - -
Prci28g0009 853 PRINTS 70kDa heat shock protein signature 363 383 - -
Prci28g0009 853 PRINTS 70kDa heat shock protein signature 140 160 - -
Prci28g0009 853 PRINTS 70kDa heat shock protein signature 30 42 - -
Prci28g0009 853 PRINTS 70kDa heat shock protein signature 332 348 - -
Prci28g0009 853 FunFam Heat shock 70 kDa protein 4 1 74 - -
Prci28g0009 853 Pfam Hsp70 protein 3 531 IPR013126 GO:0005524|GO:0140662
Prci28g0009 853 Pfam Hsp70 protein 577 702 IPR013126 GO:0005524|GO:0140662
Prci28g0009 853 MobiDBLite consensus disorder prediction 802 817 - -
Prci28g0009 853 Coils Coil 687 707 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci28g0009 4 496 Calmodulin-binding Proteins AT1G16030 33.000 2.35e-85 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci28g0009 K09489 - gmx:100813658 1370.53