Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci28g0007 ATGGATGACACTGAGGATGATGCAAAGTATGCCCCTACCCCATATGATGTAAGTCATCACCAAGGTTATGGTTATTTGAATGGTCAGAAACTTCCAGTTGGGAGCTCTCGACATTCGCTGCCAGTTAGAAGTGAATATGCTGAAGATGATAATGATTATGAGGAAGAAGATGACGGAGAACAGTTAGGACAGGAAGAAGATGATGATGATGGTGATGGTGATGATGAAGACAATGATCAAGGTAATGGTATTCATGTTCCCCAGAAAGATGGCCATGACAATGGTGATGAAGAAGAAGAAGAAGAGAATGGAGATGGGGATGATAGTGACGATGACTCTGATGACAATGATGATGATGATGATGATGATGATAAGCAGAAAAGTTACACCATAAGGATTGAAGATGATTTAGAATCTCACCCAAAAAAGAGAAAGCTGAAGAGTTTGATTTCAACTTATGAATTTGCACCCCGTGTGCCTGCACCTGCAGTTGCAGCTCCTTCAGCTCCTAAACCAGCATTTGGTGGTAGAAATGCCCTTACTGACTGGACTGAGCATGAGACATTTGTTCTTCTTGATGCTTGGGGTGACCGGTTTATTCAACGTGGAAAAAAAAGTCTTCGGTCTGAGGAATGGCAAGAAGTTGCAGAAAGGGTAAAAGAAGTTTCAAAAACTGAAAGGACAGATACGCAGTGTAGGAATAGACTCGATACATTAAAGAAAAAGTACAAAAAGGAGAAGGCCAAATTAGTAGAAATGGGTGGTGGAACCTGCAAATGGGTTTATTTTAGCAGGATGGATAAGCTGTTGTCCTCTCCTCAACAACAAGCTGGTCTATCTTGTGGTTTGGACTCAGGAGAGTATGTTTTCTCGAACCCTAGAGTTTACTTGAACCGTGCAAATGTGTTTGATGAAATGAGGGATAGTCCAGGGAATTCAGAGTCTACTGGTGAAGAAGATTCGGTTGGGCTCCACCCAAAGAAAAAAAGTTCTAGAAAGAACAATGATGAGACTTCTTCCTTCAAATTACTTGCTGATTCCATTCAGAAATTCGGTGAGATATATGAGAAAATTGAAAACAACAAAAGGCAACAGATGGTGGAACTAGAAAAGATGAGGATGGATTTCCATAAAGAATTGGAAATGCAGAAGAGGCAAATTTTCGAGAAAGTGCAGAACGAGATTGCAAAACTGCAGCAGAGAGATGAGGAGGAGAATGACGAATCTGCTGAGAATGGTATGTAA 1245 0.4088 MDDTEDDAKYAPTPYDVSHHQGYGYLNGQKLPVGSSRHSLPVRSEYAEDDNDYEEEDDGEQLGQEEDDDDGDGDDEDNDQGNGIHVPQKDGHDNGDEEEEEENGDGDDSDDDSDDNDDDDDDDDKQKSYTIRIEDDLESHPKKRKLKSLISTYEFAPRVPAPAVAAPSAPKPAFGGRNALTDWTEHETFVLLDAWGDRFIQRGKKSLRSEEWQEVAERVKEVSKTERTDTQCRNRLDTLKKKYKKEKAKLVEMGGGTCKWVYFSRMDKLLSSPQQQAGLSCGLDSGEYVFSNPRVYLNRANVFDEMRDSPGNSESTGEEDSVGLHPKKKSSRKNNDETSSFKLLADSIQKFGEIYEKIENNKRQQMVELEKMRMDFHKELEMQKRQIFEKVQNEIAKLQQRDEEENDESAENGM 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci28g0007 414 ProSiteProfiles Myb-like domain profile. 183 240 IPR001005 -
Prci28g0007 414 MobiDBLite consensus disorder prediction 48 77 - -
Prci28g0007 414 Pfam Myb/SANT-like DNA-binding domain 182 269 IPR044822 -
Prci28g0007 414 MobiDBLite consensus disorder prediction 1 145 - -
Prci28g0007 414 Gene3D - 183 245 - -
Prci28g0007 414 Coils Coil 355 408 - -
Prci28g0007 414 MobiDBLite consensus disorder prediction 125 145 - -
Prci28g0007 414 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 172 405 IPR044823 -
Prci28g0007 414 FunFam trihelix transcription factor ASIL2 183 245 - -
Prci28g0007 414 MobiDBLite consensus disorder prediction 320 336 - -
Prci28g0007 414 MobiDBLite consensus disorder prediction 94 124 - -
Prci28g0007 414 MobiDBLite consensus disorder prediction 306 338 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci28g0007 183 411 Trihelix Transcription Factor Family AT1G54060 32.857 1.66e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci28g0007 Myb_DNA-bind_4 1.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci28g0007 - - qsa:O6P43_018122 473.396