Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci282g0001 ATGAGGCCAATTTTGATGAAGGGCCATGAGAGGCCATTGACGTTTCTCAAGTACAATAGGGATGGAGATATGCTTTTCTCTTGTGCTAAGGATCACAACCCCACCGTCTGGTTCGCTGACAATGGTGAACGCTTGGGCACTTATCGCGGACACAACGGTGCTGTTTGGTGCTGTGATATCTCAAGAGATTCTTTGCGGCTTATAACAGGTCTGTGGATTTCGCTGTGGGTGACAAACTTGCTGTTATTACAACTGATCCCTTCATGGAATTGCCTTCTGGAATTCATATCAAACGCATTGCTAGAGACACCAGTGACCACAGGAAAGCTACTTAAGGAGGTAGACAAGGAAATTGGCCACAAAAAGGCGATAACATCACTTGCAAAATCTGCAGATGGTTCCCACTTCCTGACTGGCTCCCTTGATAAATCGGCCAAGCTTTGGGATACCAGATCATTGTCTCTTATCAAGACATATGTAACAGAACGACCAGTCAATGCAGTAGCCATGTCACCTCTTCTTGATCATGTGGTGATTGGAGGTGGTCAAGATGCTTCAGCTGTTACTACTACTGATCATCGTGCTGGAAAATTTGAGGCCAAGTTTTTTGATAAGATTCTTCAAGAAGAAATTGGGGGTGTGAAAGGACATTTTGGACCAATTAACGCACTTGCTTTCAACCCTGATGGAAAGAGCTTTTCAAGTGGAGGTGAAGATGGTTATGTAAGGTTGCATCATTTTGACCCAGATTACTTCAATATTAAAATATAG 771 0.4345 MRPILMKGHERPLTFLKYNRDGDMLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDISRDSLRLITGLWISLWVTNLLLLQLIPSWNCLLEFISNALLETPVTTGKLLKEVDKEIGHKKAITSLAKSADGSHFLTGSLDKSAKLWDTRSLSLIKTYVTERPVNAVAMSPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIKI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci282g0001 256 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 105 255 - -
Prci282g0001 256 ProSiteProfiles Trp-Asp (WD) repeats profile. 6 47 IPR001680 GO:0005515
Prci282g0001 256 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 117 152 - -
Prci282g0001 256 Gene3D - 1 74 IPR015943 GO:0005515
Prci282g0001 256 Gene3D - 103 256 IPR015943 GO:0005515
Prci282g0001 256 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 214 244 - -
Prci282g0001 256 ProSiteProfiles Trp-Asp (WD) repeats profile. 117 158 IPR001680 GO:0005515
Prci282g0001 256 ProSiteProfiles Trp-Asp (WD) repeats profile. 214 244 IPR001680 GO:0005515
Prci282g0001 256 Pfam WD domain, G-beta repeat 43 70 IPR001680 GO:0005515
Prci282g0001 256 Pfam WD domain, G-beta repeat 118 149 IPR001680 GO:0005515
Prci282g0001 256 Pfam WD domain, G-beta repeat 213 244 IPR001680 GO:0005515
Prci282g0001 256 SUPERFAMILY WD40 repeat-like 6 249 IPR036322 GO:0005515
Prci282g0001 256 SMART WD40_4 41 77 IPR001680 GO:0005515
Prci282g0001 256 SMART WD40_4 107 149 IPR001680 GO:0005515
Prci282g0001 256 SMART WD40_4 1 38 IPR001680 GO:0005515
Prci282g0001 256 SMART WD40_4 152 191 IPR001680 GO:0005515
Prci282g0001 256 SMART WD40_4 207 246 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci282g0001 1 256 Eukaryotic Initiation Factors Gene Family AT2G46290 50.760 2.00e-94 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci282g0001 K03246 - csav:115722050 327.791