Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci279g0002 ATGGTGAGAACCCCATGCAGCAACAAAAATGGCCTCAGGAGAGGAACATGGACTCCAGAAGAAGACATGAAGTTGGTTGCTTATATTACTAGGTATGGCTTGAATTGGCGACTACTCCCCAAGTTTGCTGGATTGGCAAGGTGTGGAAAGAGTTGCAGGCTTCGGTGGATGAACTACTTAAGACCAGACATCAAAAGAGGGAATTACACTCCCCTAGAAGACGACACTATCATCACACTTCACCAAAAGTTGAATTGTAGGTGGTCAAAGATTGCTGCTTGTTTACCGGGAAGAACTGATAACGAAATAAAAAAACCACTGGCACACAATCTCAAGAAGAGAGCTCAAGGAAACTCAGCTGGACATGAAAAGGATAAAGCCTTCAAGTCAAAGGATCAAATTCCACTTGAATCGAGCCAGAGATCTGCGACTCATCAATCACAATATGTACTACAACTGCTCCTTCTTCACAGTGTGATACATCAGCAGGCGAGTCCCAGATCTCAAGTACTTTCCCAGTGCAGCTCACTGATCATGCCGGTGGTTTCAGCAAGCCGTACATGGTTGACGTTTCCTACGTCCCCAATGAAGAATTTTTACCGTTGTCCCCTGAATATGAGTACAATGCACAGCTTTGGGAACACAGTGGCTCGCATGACGAATATATTGACTTATCTTGACGAAGGCATCTTAAGGGGAATGGAGGCAAATCTACCCAATCGACAT 726 0.4477 MVRTPCSNKNGLRRGTWTPEEDMKLVAYITRYGCXNWRLLPKFAGLARCGKSCRLRWMNYLRPDIKRGNYTPLEDDTIITLHQKLNCRWSKIAACLPGRTDNEIKKPLAHNLKKRAQGNSAGHEKDKAFKSKDQIPLESSQRSATHQSQYVLQLLLLHSVIHQQASPRSQVLSQCSSLIMPVVSASRTWLTFPTSPMKNFYRCPLNMSTMHSFGNTVARMTNILTYLDEGILRGMEANLPNRH 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci279g0002 243 Gene3D - 68 143 - -
Prci279g0002 243 MobiDBLite consensus disorder prediction 106 140 - -
Prci279g0002 243 CDD SANT 16 61 IPR001005 -
Prci279g0002 243 SUPERFAMILY Homeodomain-like 11 105 IPR009057 -
Prci279g0002 243 Gene3D - 14 66 - -
Prci279g0002 243 SMART sant 13 63 IPR001005 -
Prci279g0002 243 SMART sant 66 114 IPR001005 -
Prci279g0002 243 MobiDBLite consensus disorder prediction 117 133 - -
Prci279g0002 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Prci279g0002 243 CDD SANT 69 106 IPR001005 -
Prci279g0002 243 Pfam Myb-like DNA-binding domain 67 105 IPR001005 -
Prci279g0002 243 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci279g0002 243 ProSiteProfiles Myb-like domain profile. 62 105 IPR001005 -
Prci279g0002 243 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci279g0002 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Prci279g0002 243 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 168 - -
Prci279g0002 243 FunFam MYB-related transcription factor 13 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci279g0002 1 126 MYB Transcription Factor Family AT2G31180 64.062 7.88e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci279g0002 Myb_DNA-binding 3.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci279g0002 K09422 - rcu:8287581 198.364