Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci278g0003 | ATGGTGTCAGGATCAGGGATCTGCGCGAAGAGGGTGGTGGTTGACGCTCGTCACCACATGTTGGGTCGTCTGGCCTCGATCGTGGCCAAGGAGCTCCTCAATGGTCAGAGCGTCGTCGTGGTGAGGTGTGAGGAGATTTGCATCTCCGGCGGCCTTGTGAGGCAGAAAATGAAGTACATGAGGTTCCTTCGCAAGCGCATGAACACCAAGCCTTCCCACGGGCCCATTCACTTCCGAGCTCCGAGCAAGATCTTCTGGCGCACTGTTCGTGGAATGATCCCCCACAAGACCAAGCGTGGAGCAGCTGCACTTGCTCGATTGAAGGTTTATGAGGGCATACCCCCTCCATATGACAAGAAGAAGAGGATGGTTGTCCCTGATGCTTTGAAAGTGTTGAGGCTTCAGAAGGGACACAAATACTGCTTGTTGGGAAAATTGTCATCTGAGGTTGGATGGAACTACTATGATACCATCAGGGAGTTGGAGAAGAAGAGAAAGGAGAGAGCACAATTGGTTTATGAGAGGAAGAAGCAGCTCAACAAACTGAGGGTGAAAGCTGAAAAGATCGCAGACGAAAAGCTTGGTCCCCAGCTTGAAATCCTTGCTCCCGTTAAGTACTGA | 621 | 0.5137 | MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQSVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGIPPPYDKKKRMVVPDALKVLRLQKGHKYCLLGKLSSEVGWNYYDTIRELEKKRKERAQLVYERKKQLNKLRVKAEKIADEKLGPQLEILAPVKY | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci278g0003 | 206 | Gene3D | Ribosomal protein L13 | 8 | 154 | IPR036899 | GO:0003735|GO:0005840|GO:0006412 | |
Prci278g0003 | 206 | ProSitePatterns | Ribosomal protein L13 signature. | 89 | 112 | IPR023563 | GO:0003735|GO:0005840|GO:0006412 | |
Prci278g0003 | 206 | FunFam | 60S ribosomal protein L13a-4 | 8 | 154 | - | - | |
Prci278g0003 | 206 | SUPERFAMILY | Ribosomal protein L13 | 12 | 154 | IPR036899 | GO:0003735|GO:0005840|GO:0006412 | |
Prci278g0003 | 206 | Hamap | 50S ribosomal protein L13 [rplM]. | 11 | 135 | IPR005822 | GO:0003735|GO:0005840|GO:0006412 | |
Prci278g0003 | 206 | FunFam | 60S ribosomal protein L13a | 155 | 206 | - | - | |
Prci278g0003 | 206 | CDD | Ribosomal_L13 | 12 | 113 | IPR005822 | GO:0003735|GO:0005840|GO:0006412 | |
Prci278g0003 | 206 | PANTHER | RIBOSOMAL PROTEIN L13 | 1 | 186 | IPR005822 | GO:0003735|GO:0005840|GO:0006412 | |
Prci278g0003 | 206 | Gene3D | - | 156 | 206 | - | - | |
Prci278g0003 | 206 | Pfam | Ribosomal protein L13 | 10 | 115 | IPR005822 | GO:0003735|GO:0005840|GO:0006412 | |
Prci278g0003 | 206 | NCBIfam | 50S ribosomal protein L13 | 12 | 154 | IPR005755 | GO:0003735|GO:0006412|GO:0015934 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci278g0003 | 1 | 206 | Cytoplasmic Ribosomal Protein Gene Family | AT5G48760 | 90.291 | 1.42e-140 | 389 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci278g0003 | K02872 | - | gmx:100813340 | 394.43 |