Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci275g0001 ATGTGCAATGACGATGGACCTTGTCGAGACTGTTCACCGAAGCAGTTTCGGATGATCTTCTTCGAGGGACCAACAGATGAAGCTCTAAAGAAAAAAATAGATGCCCAGAATTGTCAGAAGTTTTCCTATAAAACCTTATGTCAAGCTACCAATAGATTTGCCTCTCGAAATAAGCTCGGTCAAGGAGGCTATGGACTTGTGTACAAGGGGGAGTTGGATGATGGGAAAGAGATTGCAGTGAAGGTGCCATTAAATTTGTCAACACAGCATGAGGAACAATTGATAAAGGAGATAGAGTTGCTGAGTAGCGTGAAACACCCTAATGTGGTAAAATTGTTTGGTTATTGCACTAACAAGAAAAAAATCTTACTTGTTTACGAGTACGTTCCAAACAAGAGTCTCAACATGCTTTTATTTGGTCCCAATAGGAGAGACCAGGAGCTTGATTGGAGTCGAACCTACAACATAATCGTAGGCATCGCAAGGGGTTTGAGCTATCTTCACATTAACCCCCAAAATTGCATCATCCATCGTGACATAAAGCCTGAAAATATCTTGCTTGATCATAAATGGGTGCCCAAGATTTCTGACTTTGGCCTTAGCCGCCTATTTGAGGAAGACCAAACCTCTGTCTATACTGATACAATAGCTGGCACTCGGGGATATGTGGCTCCAGAACATCTGATATCAGTAAAAACAGATGTTTATAGTTTTGGAGTTCTGGTGCTGGAACTGATAAGTGGGAAAAGATCATCATCATTTATGCCACCAGAGGGCAGTGCTATTTGTTTGCTTGATTGGGCATACAAGCTTTATGAGGAAAATAGGATCTTAGAAATTATGGACCCTGCTTTAGCAAATTCCGCAGTGACGGAGCAAGTGATAAAGTGCATTAAAATGGGTTTACGATGCGTTCAAGGTGACCCAGATTTACGTCCAGATATGGAGCGTTGTCTGTCCAAGTTAACATGTTGTGATCAAGACCACAATGAAGCCTCAATTTGCGAACCAGGAACACTTGGTTATGGACGCCATCAATCAGTCTCCCTCTCTACATTTGAAGGAGCAGAACATGAGGCGAGTAATAATCTTGAGGATATTTCTGGGGATGAGTATGAAGGTGAGGATAGTTGA 1134 0.4198 MCNDDGPCRDCSPKQFRMIFFEGPTDEALKKKIDAQNCQKFSYKTLCQATNRFASRNKLGQGGYGLVYKGELDDGKEIAVKVPLNLSTQHEEQLIKEIELLSSVKHPNVVKLFGYCTNKKKILLVYEYVPNKSLNMLLFGPNRRDQELDWSRTYNIIVGIARGLSYLHINPQNCIIHRDIKPENILLDHKWVPKISDFGLSRLFEEDQTSVYTDTIAGTRGYVAPEHLISVKTDVYSFGVLVLELISGKRSSSFMPPEGSAICLLDWAYKLYEENRILEIMDPALANSAVTEQVIKCIKMGLRCVQGDPDLRPDMERCLSKLTCCDQDHNEASICEPGTLGYGRHQSVSLSTFEGAEHEASNNLEDISGDEYEGEDS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci275g0001 377 Gene3D Phosphorylase Kinase; domain 1 24 128 - -
Prci275g0001 377 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Prci275g0001 377 ProSiteProfiles Protein kinase domain profile. 53 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci275g0001 377 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 129 331 - -
Prci275g0001 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Prci275g0001 377 Pfam Protein kinase domain 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci275g0001 377 SMART serkin_6 53 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci275g0001 377 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 27 128 - -
Prci275g0001 377 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 357 - -
Prci275g0001 377 MobiDBLite consensus disorder prediction 354 377 - -
Prci275g0001 377 SUPERFAMILY Protein kinase-like (PK-like) 35 323 IPR011009 -
Prci275g0001 377 Gene3D Transferase(Phosphotransferase) domain 1 129 337 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci275g0001 25 323 Receptor kinase-like Gene Family AT4G11530 44.884 8.84e-83 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci275g0001 Pkinase 8.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci275g0001 - - pcin:129296199 776.548