Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci257g0003 ATGGGTAGTGCTTTCACCATTTCTAGCACAGAAAACAAGTTCATAAATGTTGGTTGTGATACTTACGGCTACTTAAATAGTTTCGTGAACCACAGTACTACCGTTTATTCCACCGGCTGCTTAACGCGGTGCGACACATTTCCGAGTGAGATGTATGCTAAAAATTGTTCAGGTATTGGGTGTTGCCAGGTGGATATTCCTGTTGGAATGAGGAATATCGATTTTGAAGCATATAGCTTCAAGAACCATGCGAATATTTCGGAATTCAACAATTGTAGCTATGCTTTTGTTGTTAAAAAGGATTGGTACAATTTCTCCCTTGGGCATCTAAAGCAGTTACCCTTTGATGAAGCCCCGCTTGTGCTAAATTGGACAGTTTCAAATGTTACTTGTGATGTTGCTAAGGCAAGATTAGACTATGCTTGCACCAACAACACCGATTGTGTGGACTCTCCTGGTGGATTTGGGTACAATTGCAGATGCAAACATGGTTTCGAAGGAAACCCATACCATCCTGATGGATGTCATGATATAGACGAATGTCAAGATCATTCAATGAACAAATGCAGCGTTATTGAATATTGTGTCAACACGATCGGGGGTTTTCGTTGCGGACCAAAAAGAAGTCTATTTTCAAGGATCTTCATTGGTACAAGTGCAGCCTTAGTTGCTTTACTTTTTAGTATGTCTTGGCTGTATTTGGTATACCGAAAGAGGAATCTCATCAAACAAAAGGAACATTTTTTCAGACAAAATGGTGGCTTGATCTTGCAACAACGACTCTCTGTTAAAGAAGCTTCTTCCCAAACAGCTAAAATCTTCACTATGGAGGAGTTGAAAAGGGCAACCAACAACTACCATGATAGCTTAATACTTGGAAAAGGAGGTTATGGAACTGTTTATAAGAGAATTCTTAATGACAACAAAGTTGTTGCAATCAAGAAGTCCAAACTTGTTGATCAAAACCAAATTGAACAATTCATCAACGAGATGGTCATCCTCTTGCAAATTAATCATAGGAATGTGGTGAAGCTACTTGGATGTTGTTTGGAAACTGAAATTCCTTTGTTAGTTTATGAGTTCATCAACAATGGCACCCTTTATGATTGCATTCACAATCCGGGGAAGGCTTCCAAGATGTCTTGGGAAACACGTCTGAAGATTGCAGCAGAGACAGCCGAAGCACTATCATATCTTCACTCTAGTGCCTCCACACCCATAATTCATAGAGATGTGAAGCCATCTAACATACTTTTGGATGACTCCTACACAGCCAAAGTGTCTGATTTTGGAGCTTCTAGGTTGGTTCCAGTTGATCAAACAGAATTAGCCACAATGGTACAAGGAACTCTAGGATACTTGGATTCAGAATACATGCAAACCAACCAACTCACTGAAAAAAGTGATGTCTACAGTTTTGGGGTGGTGCTTGTGGAGCTACTTACAGGAAAGATAGCTCTTTCATTTGATAGACCGGAGGACGAAAGATGCCTTGCCATGCACTTCCTATCATCCTTGAGGAAAGGTCAATTGTTTGAAGTACTTGAAGTTGGCATAATGATTGAGAACAATGAAGAGATACTAAAAGAAGTGGCTTCACTTGCTAAGAGGTGCTTAAGACTTAGAGGTGATGAGAGACCTAGCATGAAAGAAGTTGCAATGGAGTTAGAGGGAATAAGGATGACAAGGAAGCATACATGGGTAAACAATGATAATAATTCAGGGGAAATTGAACCATTGCTTGGAGAGACATCTGGCATAAGTGAAAGTGGCGATAGCATCAGCTATAGAAACACAGGAGATTATAGCATTACAAATCATGTGCTGATTGACTTGAATGATGGAAGGTGA 1851 0.3998 MGSAFTISSTENKFINVGCDTYGYLNSFVNHSTTVYSTGCLTRCDTFPSEMYAKNCSGIGCCQVDIPVGMRNIDFEAYSFKNHANISEFNNCSYAFVVKKDWYNFSLGHLKQLPFDEAPLVLNWTVSNVTCDVAKARLDYACTNNTDCVDSPGGFGYNCRCKHGFEGNPYHPDGCHDIDECQDHSMNKCSVIEYCVNTIGGFRCGPKRSLFSRIFIGTSAALVALLFSMSWLYLVYRKRNLIKQKEHFFRQNGGLILQQRLSVKEASSQTAKIFTMEELKRATNNYHDSLILGKGGYGTVYKRILNDNKVVAIKKSKLVDQNQIEQFINEMVILLQINHRNVVKLLGCCLETEIPLLVYEFINNGTLYDCIHNPGKASKMSWETRLKIAAETAEALSYLHSSASTPIIHRDVKPSNILLDDSYTAKVSDFGASRLVPVDQTELATMVQGTLGYLDSEYMQTNQLTEKSDVYSFGVVLVELLTGKIALSFDRPEDERCLAMHFLSSLRKGQLFEVLEVGIMIENNEEILKEVASLAKRCLRLRGDERPSMKEVAMELEGIRMTRKHTWVNNDNNSGEIEPLLGETSGISESGDSISYRNTGDYSITNHVLIDLNDGR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci257g0003 616 Gene3D Laminin 130 179 - -
Prci257g0003 616 SMART serkin_6 286 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci257g0003 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Prci257g0003 616 SUPERFAMILY Protein kinase-like (PK-like) 266 557 IPR011009 -
Prci257g0003 616 CDD EGF_CA 177 204 - -
Prci257g0003 616 FunFam Wall-associated receptor kinase 2 256 361 - -
Prci257g0003 616 Gene3D Phosphorylase Kinase; domain 1 253 361 - -
Prci257g0003 616 ProSitePatterns Calcium-binding EGF-like domain signature. 177 204 IPR018097 GO:0005509
Prci257g0003 616 CDD STKc_IRAK 292 559 - -
Prci257g0003 616 Gene3D Transferase(Phosphotransferase) domain 1 362 579 - -
Prci257g0003 616 Gene3D Laminin 180 209 - -
Prci257g0003 616 Pfam Protein kinase domain 286 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci257g0003 616 CDD EGF_CA 142 167 - -
Prci257g0003 616 Pfam Calcium-binding EGF domain 177 204 IPR001881 GO:0005509
Prci257g0003 616 FunFam Wall-associated receptor kinase 2 129 179 - -
Prci257g0003 616 ProSiteProfiles Protein kinase domain profile. 286 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci257g0003 616 FunFam Wall-associated receptor kinase 2 362 578 - -
Prci257g0003 616 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 5 563 IPR045274 GO:0007166
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci257g0003 9 616 Receptor kinase-like Gene Family AT1G21230 47.476 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci257g0003 Pkinase 4.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci257g0003 - - pcin:129296124 1258.05