Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci257g0001 ATGGCTTCTTCCTCCAATGTGAAACCATGGCTTTGTTTAAGCTTTCTCTTCGTTCTTCACACTTCTCTGCTCGCACCAATCTGTAATTCCCAGCCTCAGAACATCGAAACCTTCTTTCCATCTCAAACTCAACCCCCAGCTTCTGAACCGAGCATTTCTCTACCACCGCCGGTTGTTCCGCCGTCATCAGAAGTACAGCCTGCACCGACGCCGGCGTCGGCGGATACAACCAGAAGTTCATCATCGAAGGGTAAGGTAGGGAGGGCTGTGGCTATTACTGCAGCAAGCACTCTGGTTGTTTCTGCGTTAGCGTTCTTCTTTGTCAGATGGTGTTTAAAGAAAAGACGTAGAGAAGAGAGACGTGTGAGCTCTGCTTCAGAACCTGGGGATGGAAATGCAAATGGAAGAGATGTGACTCAGACGAACACGTTTGAGCGAATTGAAGGGAATGTGAAGGGATTGATTGTTGATGAGAATGGTTTGGATGTGATTTATTGGAAGAAGCTTCAAGGGAGAAATAGCTCCAAGAAGGGATTACAGAAGGAGGTTCGAAGCATAGCTAAAGAACAAGATCAAGAACAAGAAGTAGAACAAGTAGAGATAGAAACAGAAACAGAAACAGAAACAGAAGATGGGTATGGAGGACATCATCGCCGGAAAAAATCTGAGCCTGTTCAAGAAATTCCTCTGCTTCGTGGTAAGTCTTCGGCTTCGGAGAAGAATTTATTATCAGAAGGTGAACATGGGTTGAATCGGAGCTGGAGGAGAAACTTGTCTCGAAAAATAGCTCCTCCGCCTGCGGCGCCGGCGTCAGCGGTGGCGACTGTTTCACCAACATTACCACCACCACCGGCCGCTTATTTTTCCGCTGTTTCAAAAGCAACGCCGCCGCCTCCACCGCATTCTGCGGCTGCTTCTTCTGCTTCACCACCATTACCACCACCACCTTCTGCTTACTTTTCTGCTGTGAACAAAACGAAAAGCACTGAAACAAAACCACCTCCACCTCCACCTCCACCTCCTCCGGCAATTCCGGATAAAAAGGGTCCGGCACCACCTCCCCCTCCTCCGCCGGTGCCGGCTAAAAAGAGTCCAGCACCACCACCTGCTCCGCCCGTGGCCGGCAGTTTGAGGTCATCTTCAAAACCACCGCCTACCCCAGTTGAAAAGCCTCCAGGAGAAAGCGATGATAATAAAGTGAAACTTAAACCTCTGCATTGGGATAAGGTTACCGCTAATGCTGATCATTCCATGGTTTGGGACAAGTTGGATCGTGGCTCCTTCAGGGTTGATCAAGATCTTATGGAAGCTCTATTTGGGTATGTGGCTACAAGCAAAAGAACACCAAGAGGGCAAAGCAATTCATCCAGTCCAAGCAAGGAGGTCTCTGCACAATCAAGCACAACTTTCATCCTTGATTCAAGAAAATCCCAGAATATTGCTATTGTTTTGAGATCTCTAGCTGTGTCGCGACGAGAAATTCTTGATGCCCTTGATGAAGGTCAAGGCCTTAATTCAGATACAATTGAGAAGCTTGTTAGAGTTGCTCCAACCCAAGAAGAGCAATCTAATATCCTTGATTACAATGGAGACCCAGCAAGACTTGCTGTTGCAGAATCTTTCCTCTATGACATCCTCAGAGCTGTTCCTTCTGCTTTCAAGCGCTTGAATGCTATGCTTTTCAGGTCGAACTATGACACAGAGTTAATGGAGATCAAGGAGTCTCTGAGCACTCTTGAATTGGGCTGCAAGGAGCTTCGAACTCGAGGTCTCTTTGTGAAGCTTCTTGAAGCAGTTCTTAAAGCCGGAAACCGTATGAATGCTGGTACTTCAAGAGGCAATGCTCAAGCTTTCAACTTGTCTTCTTTGAGGAAGCTCTCTGATGTCAAAAGCACAGATGGGAAAACCACATTGCTTCACTTTGTAGTCAAAGAAGTAGTCCGGTCTGAGGGAAAACGCTGCGTTTTTAACCGTGATCACCGCCTGAGTCGCAGCGGAAGTAGGAAAATAAACAGCAAAGGAGACACTGAGAACTCTGTTTCAGAAGAACAAAGAGAAGTGGAATACCTAAGGCTAGGATTACCATTTGTTGGAGGAATCAGTACAGAGTTTTCCAATGTGAAGAAAGCAGCCCTTATAGATTACAATAGTTTAGTTGCTTCAATCTCATCCCTCTCAACTCGGATAGCTGAAATCAGACAACTTGTTTCAGAGTGTGGGAATGGTAAAGGAGGGAGCTTTGTGAGGGAAATGGACCATTTTCTGAGAAATGCTGAGGAGGAATTGAGATCAGTGAGAGATGAGCAGACAAGGGTAATGCAGATTGTGAAGAAAACAACAGAGTATTATCAAGGAGGAGCTTCAAAAGATAAAGCAGAGAATCTTCTGGAAATATTTGTCATCGTCAAGGATTTTCTGGGAATGGTAGATCAGGCCTGCATCGACATCGCTCGTAACATGCAGAAGAGGAAGACGACAAAAACAAATTCTGGGTAA 2496 0.4611 MASSSNVKPWLCLSFLFVLHTSLLAPICNSQPQNIETFFPSQTQPPASEPSISLPPPVVPPSSEVQPAPTPASADTTRSSSSKGKVGRAVAITAASTLVVSALAFFFVRWCLKKRRREERRVSSASEPGDGNANGRDVTQTNTFERIEGNVKGLIVDENGLDVIYWKKLQGRNSSKKGLQKEVRSIAKEQDQEQEVEQVEIETETETETEDGYGGHHRRKKSEPVQEIPLLRGKSSASEKNLLSEGEHGLNRSWRRNLSRKIAPPPAAPASAVATVSPTLPPPPAAYFSAVSKATPPPPPHSAAASSASPPLPPPPSAYFSAVNKTKSTETKPPPPPPPPPPAIPDKKGPAPPPPPPPVPAKKSPAPPPAPPVAGSLRSSSKPPPTPVEKPPGESDDNKVKLKPLHWDKVTANADHSMVWDKLDRGSFRVDQDLMEALFGYVATSKRTPRGQSNSSSPSKEVSAQSSTTFILDSRKSQNIAIVLRSLAVSRREILDALDEGQGLNSDTIEKLVRVAPTQEEQSNILDYNGDPARLAVAESFLYDILRAVPSAFKRLNAMLFRSNYDTELMEIKESLSTLELGCKELRTRGLFVKLLEAVLKAGNRMNAGTSRGNAQAFNLSSLRKLSDVKSTDGKTTLLHFVVKEVVRSEGKRCVFNRDHRLSRSGSRKINSKGDTENSVSEEQREVEYLRLGLPFVGGISTEFSNVKKAALIDYNSLVASISSLSTRIAEIRQLVSECGNGKGGSFVREMDHFLRNAEEELRSVRDEQTRVMQIVKKTTEYYQGGASKDKAENLLEIFVIVKDFLGMVDQACIDIARNMQKRKTTKTNSG 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci257g0001 831 Coils Coil 748 775 - -
Prci257g0001 831 MobiDBLite consensus disorder prediction 209 227 - -
Prci257g0001 831 PANTHER FORMIN-RELATED 327 821 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Prci257g0001 831 SMART it6_source 392 824 IPR015425 -
Prci257g0001 831 MobiDBLite consensus disorder prediction 127 144 - -
Prci257g0001 831 MobiDBLite consensus disorder prediction 68 86 - -
Prci257g0001 831 MobiDBLite consensus disorder prediction 118 144 - -
Prci257g0001 831 ProSiteProfiles Formin homology-2 (FH2) domain profile. 392 831 IPR015425 -
Prci257g0001 831 MobiDBLite consensus disorder prediction 49 67 - -
Prci257g0001 831 MobiDBLite consensus disorder prediction 38 86 - -
Prci257g0001 831 MobiDBLite consensus disorder prediction 177 400 - -
Prci257g0001 831 Pfam Formin Homology 2 Domain 394 809 IPR015425 -
Prci257g0001 831 MobiDBLite consensus disorder prediction 177 194 - -
Prci257g0001 831 MobiDBLite consensus disorder prediction 330 374 - -
Prci257g0001 831 SUPERFAMILY Formin homology 2 domain (FH2 domain) 405 825 - -
Prci257g0001 831 Gene3D Formin, FH2 domain 391 821 IPR042201 -
Prci257g0001 831 MobiDBLite consensus disorder prediction 293 318 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci257g0001 374 825 FH2 protein (formin) Gene Family AT1G70140 58.150 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci257g0001 - - pcin:129296125 1381.31