Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci256g0005 ATGGCAGCAAAAGCAACAAGCAGCTCCACCATTATTATTGTGGCTGCTTTCATTGCAGCTCTCATCACAGGCACCAACATCACCACTGTCGTCTCCGACGACACCGCCCCAGTTCCCGGCGACAAGTCCCAGCTGAACAAATGGTTCAAGGAGAACGTGAAGCCATTGTCGACACAGTTACGACGACGAAGGACGATGATTCAACCTTCAGTTGCAGAAGCAGAGAAACGTGTGAGGATGGTGAAGGTGATGAAAGATGGAAGTGGGGACTTCAGGACGGTGACGGCGGCCATTAACAGCATCCCGGAAGGTAACCGGAGACGAGTGATTGTGTATATCGGAAGCGGGACTTACTATGAGAAGATAAAGATAGAGAAGACGAAGCCTTTTGTGACTCTTTATGGTGATCCTCAGAAATGGCCAAACTTGACTTTCCATGGAACTGCACAACGATTTGGAACCGTGGATAGCGCTTCGTTGATTGTTGAATCTGACTACTTCGTTGCTGTCAATCTCATTATTTCGAACTCAGCACCAATGCCGAACGGGAAGATTGCGAGGCCGCAGGCGGTGGCGTTGAGGATTTCCGGCAACTATGCGGCGTTCTACAGATGCGCAATGTTAGGATATCAGGACACCATTTGTGACGACAGAGGCAAGCATTTTTTCAAAGATTGCTACATTCAGGGAACCATGGATTTCATTTTTGGAAGTGGCAAATCTCTTTATCTGAACGCAAGACTGAAGGTGGTGGGGAGAAACGGAGGGGTCATAGCAGCGCCAGCAAGGACGAATCAATCGGACGACACGTGTGGGTATTCGTTTGTGCATTGCGACATAAGCGGAACAGCCAATGGCACGTACTTGGGGAGAGCGTGGATGTCACATCCCAAGGTGGTCTACGCTTACACTTCCATGAGCTCAATTGTGAACCCTCTCGGCTGGGACGATAGCCCTCAAGGAGCTCCAAACACTGTGTATTATGGAGAGTACAAGAACAAAGGAGTAGGTGCGAGGAGGACAGGACGTGCAAATTTCACAAAGTGGCTTAGACGTTCAGAGGCTTTACCATTCATCACTCTCAGCTACATTGAGGCTTCCAAGTGGTTGCTTCCTCCCCCAACACTTCCTTAG 1134 0.4938 MAAKATSSSTIIIVAAFIAALITGTNITTVVSDDTAPVPGDKSQLNKWFKENVKPLSTQLRRRRTMIQPSVAEAEKRVRMVKVMKDGSGDFRTVTAAINSIPEGNRRRVIVYIGSGTYYEKIKIEKTKPFVTLYGDPQKWPNLTFHGTAQRFGTVDSASLIVESDYFVAVNLIISNSAPMPNGKIARPQAVALRISGNYAAFYRCAMLGYQDTICDDRGKHFFKDCYIQGTMDFIFGSGKSLYLNARLKVVGRNGGVIAAPARTNQSDDTCGYSFVHCDISGTANGTYLGRAWMSHPKVVYAYTSMSSIVNPLGWDDSPQGAPNTVYYGEYKNKGVGARRTGRANFTKWLRRSEALPFITLSYIEASKWLLPPPTLP 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci256g0005 377 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 74 370 - -
Prci256g0005 377 Gene3D - 76 372 IPR012334 -
Prci256g0005 377 Pfam Pectinesterase 81 365 IPR000070 GO:0030599|GO:0042545
Prci256g0005 377 FunFam Pectinesterase 76 372 - -
Prci256g0005 377 SUPERFAMILY Pectin lyase-like 81 371 IPR011050 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci256g0005 30 376 Carbohydrate Esterase AT1G69940 52.586 2.21e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci256g0005 K01051 - gmx:100816036 439.113