Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci256g0004 ATGACGGTGGCCACCAAAATAAGTCGTGTTTCTTCAATTCAGGTGGCCGTGGTGGCGGTCATCGTCGCCGCCACGGCGGTGTTATCCGACGACAATGTGCCGATCCCGTCAGACAAAGATCAATTGGACCAATGGTTCTCACAGAACGTGCAGCCATTATCTGGCCGGAAGGGAACTCTGGACCCAGACCTGGTGGCCGCAGAAGCTTCTCCGAAGGTTGTTAAGGTTTCACAAGACGGAAGCGGCGACTTCAAGACGATCACCGACGCGATTAACAGCGTTCCGGTGAATAACGCGAAGCGAGTGATCATCAAAATCGCCGGTGGAGTTTATACAGAGAAGGTCACGATTGATAGGACGAAGGATTTCATCACTCTCCTTGGTGATCCAAAAAACATGCCTAACTTGACCTATGGTGGCACCGCCAAACAATACGGCACCGTTGATAGTGCTACACTCATTACCAACGGAAATTACTTCGTCGCTGCAAATATTATTTTCTCGAATTCGGCGCCGATACCGGACGGGCGAAGGGAGGGAGCTCAGGCGGTGGCGATCCGTGTGTCCGGCGACAAGTCCGCCTTCTACAACTGCGTGTTATTAGGGTTTCAAGACACGCTATGTGATGACAGAGGAAACCATTTGTTCAAGGACTGTACAATCCAAGGCACAGTTGATTTCATATTTGGGAGCGGCAAGTCGCTGTATCTGAACACAAAGCTGGTGGTGGTGGGGAACGTCGGCGGCGTGATCGCAGCTCAGGCGAGAGAGAGCGACGACGACACCATAGGGTACTCGTTTGTTCACTGTGACATAAGTGGGAGTGCCAATGGGACGTTCTTGGGAAGAGCATGGATGTCTCATGGCAGAGTTGTGTATGCTTACACTTCCATGAGTGACATTATTACTCCTCTTGGTTGGAACATCAACAACCATCCTTCTATGGCTCAGACGGTATATTTTGGAGAGTATCAGAACAGCGGAGATGGTGCAAATACCAAAGGACGTGCCCCCTTCACAAAGTTCCTTAGTGATGCTGATGCCAAGGAATTCCTTTCTCTTGGCTTCATTCAAGCTTCTGAGTGGCTGCTTCCTCCTCCTCAAGCCTAA 1110 0.5063 MTVATKISRVSSIQVAVVAVIVAATAVLSDDNVPIPSDKDQLDQWFSQNVQPLSGRKGTLDPDLVAAEASPKVVKVSQDGSGDFKTITDAINSVPVNNAKRVIIKIAGGVYTEKVTIDRTKDFITLLGDPKNMPNLTYGGTAKQYGTVDSATLITNGNYFVAANIIFSNSAPIPDGRREGAQAVAIRVSGDKSAFYNCVLLGFQDTLCDDRGNHLFKDCTIQGTVDFIFGSGKSLYLNTKLVVVGNVGGVIAAQARESDDDTIGYSFVHCDISGSANGTFLGRAWMSHGRVVYAYTSMSDIITPLGWNINNHPSMAQTVYFGEYQNSGDGANTKGRAPFTKFLSDADAKEFLSLGFIQASEWLLPPPQA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci256g0004 369 Gene3D - 72 366 IPR012334 -
Prci256g0004 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 66 363 - -
Prci256g0004 369 ProSitePatterns Pectinesterase signature 2. 221 230 IPR033131 -
Prci256g0004 369 FunFam Pectinesterase 69 365 - -
Prci256g0004 369 Pfam Pectinesterase 74 359 IPR000070 GO:0030599|GO:0042545
Prci256g0004 369 SUPERFAMILY Pectin lyase-like 68 363 IPR011050 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci256g0004 12 367 Carbohydrate Esterase AT1G69940 57.022 2.63e-150 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci256g0004 K01051 - egr:104426935 465.307