Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci256g0001 ATGGCTGTGTCTGTGTCTTGTTTCTTCTTGTTTCAGTTTATGGCTCTCTCTTTCTCTGCCATGGCCTCTCTTACTTTTGATAATGATTGGCATGATGCTCATGCAACTTTCTATGGTGACATGTCTGGAGGCGAAACCATGCAAGGAGCTTGTGGTTATGGAGACCTCTTCAAGCAAGGCTATGGCCTGGAGACGGCAGCCCTAAGCACAGCTCTCTTCAACAATGGCCTCACCTGCGGCGCCTGCTTCGAGCTCGAGTGCGTCAACGACCCTCAGTGCATCTCCGGCGCCGGCACCATCAAGATCACCGCCACCAACTTCTGTCCACCCAACCACTCTCCTCCTGACGTCAACCATTGGTGCAACCCTCCCCAGCAACACTTCGACCTCTCCATGCCCATGTTTGTCAAGCTCGCCCCCTACAAGGCCGGCATCATCCCCGTCCGCTACCGCCGCATCGCCTGCGCCAAGTCCGGCGGCGTCAAGTTCGAGCTCAAGGGCAACCCTTATTGGATAACGGCGCTGTTCAACGTGGCCAACGCCGGCGACATCACCAACGCCAAGATCAGAGGCGGTAACGGCGGTGGCGGGTGGATTCAGATGTCGAGGAATTGGGGTCAGTTGTGGCAGACGGGGACAAACTTGGTGGGACAGAGTTTATCGTTTCAGGTTACTACAAGTGATGGGAAGACGTTGGAGTTTGATAATGTTGCGCCGTCGAATTGGCAGTTTGGTCAGACTTATGAGGGAAATCAGAACTTTTAA 765 0.5425 MAVSVSCFFLFQFMALSFSAMASLTFDNDWHDAHATFYGDMSGGETMQGACGYGDLFKQGYGLETAALSTALFNNGLTCGACFELECVNDPQWXISGAGTIKITATNFCPPNHSPPDVNHWCNPPQQHFDLSMPMFVKLAPYKAGIIPVRYRRIACAKSGGVKFELKGNPYWITALFXNVANAGDITNAKIRGGNGGGGWIQMSRNWGQLWQTGTNLVGQSLSFQVTTSDGKTLEFDNVAPSNWQFGQTYEGNQNF 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci256g0001 256 Gene3D - 15 157 IPR036908 -
Prci256g0001 256 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 171 252 IPR007117 -
Prci256g0001 256 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 161 IPR007112 -
Prci256g0001 256 SUPERFAMILY PHL pollen allergen 158 252 IPR036749 -
Prci256g0001 256 PANTHER EXPANSIN-A15 12 254 IPR002963 GO:0009664
Prci256g0001 256 Pfam Lytic transglycolase 65 151 IPR009009 -
Prci256g0001 256 SMART dpbb_1 65 151 IPR007112 -
Prci256g0001 256 PRINTS Expansin/Lol pI family signature 144 160 IPR007118 GO:0005576
Prci256g0001 256 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Prci256g0001 256 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Prci256g0001 256 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Prci256g0001 256 PRINTS Expansin/Lol pI family signature 47 65 IPR007118 GO:0005576
Prci256g0001 256 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Prci256g0001 256 CDD DPBB_EXPA_N 29 156 - -
Prci256g0001 256 PRINTS Expansin signature 119 136 IPR002963 GO:0009664
Prci256g0001 256 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Prci256g0001 256 PRINTS Expansin signature 60 74 IPR002963 GO:0009664
Prci256g0001 256 PRINTS Expansin signature 87 98 IPR002963 GO:0009664
Prci256g0001 256 PRINTS Expansin signature 136 149 IPR002963 GO:0009664
Prci256g0001 256 PRINTS Expansin signature 160 172 IPR002963 GO:0009664
Prci256g0001 256 PRINTS Expansin signature 172 193 IPR002963 GO:0009664
Prci256g0001 256 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Prci256g0001 256 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Prci256g0001 256 Gene3D - 161 256 IPR036749 -
Prci256g0001 256 SUPERFAMILY Barwin-like endoglucanases 14 179 IPR036908 -
Prci256g0001 256 Pfam Expansin C-terminal domain 162 241 IPR007117 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci256g0001 26 256 Expansin Gene Family AT5G39280 64.935 2.20e-112 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci256g0001 - - gsj:114422475 373.244