Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci252g0004 ATGTGTGGTGGAGCTATCATTTCCGATTTCATTGCCGTCAAGCGAGGCCGGAAACTCACCGCCGGTGACTTCTGGTCCGAGCTCGACCCTTTCTCCGACCTCCTTGGCTTCGATATTAACGCCGGTTCTGCCAAAAACCAAACGCCTCGGAAACTCCCTCAAGTCCCAATCAGTAAAGAGGCAGGCGAGAAGAAGGAGAAGAAAAGCGTTAGCGCAGAGAAAGCAGGCGGGAAGAGCACTGGACAGAGAGCACGCAAGAACGTGTACAGAGGCATAAGGCAGAGGCCGTGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGCGTCCGGGTGTGGCTCGGCACCTACAACACCGCCGAAGAAGCCGCCAGAGCCTACGACGAAGCGGCCAAGCGCATCCGCGGCGACAAAGCCAAGCTCAACTTCCCGGCCGCTACCGCCCCGAGTCCTCAGCCGGAGCGACCCGCCAAGAAGCGGTGCCTGAGCCCAGAGCTGAGTGACGGGAGCAACCATCCAACCGGGCCACCGACGCCGTACCAGGCGGATCTGGAGCTGAAGCAGCAGATATCAGACCTGGAGTCGCTGCTGGGACTGGAGCCGGAGGAAGAGACGAGCGAGCAGCAGCAGGCGGTGAGCGGAGGAGGAGCAGCGACGGCGACGAGTGGGCGGAGTCGGTGGAGATGTGGATGCTGGACGACGTCGTGTTGA 714 0.6148 MCGGAIISDFIAVKRGRKLTAGDFWSELDPFSDLLGFDINAGSAKNQTPRKLPQVPISKEAGEKKEKKSVSAEKAGGKSTGQRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPAATAPSPQPERPAKKRCLSPELSDGSNHPTGPPTPYQADLELKQQISDLESLLGLEPEEETSEQQQAVSGGGAATATSGRSRWRCGCWTTSC 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci252g0004 237 MobiDBLite consensus disorder prediction 43 85 - -
Prci252g0004 237 MobiDBLite consensus disorder prediction 57 73 - -
Prci252g0004 237 MobiDBLite consensus disorder prediction 199 226 - -
Prci252g0004 237 SUPERFAMILY DNA-binding domain 88 146 IPR016177 GO:0003677
Prci252g0004 237 Pfam AP2 domain 88 137 IPR001471 GO:0003700|GO:0006355
Prci252g0004 237 PANTHER DNA-BINDING DOMAIN 65 195 IPR044808 GO:0003700|GO:0009873
Prci252g0004 237 MobiDBLite consensus disorder prediction 141 182 - -
Prci252g0004 237 CDD AP2 89 147 IPR001471 GO:0003700|GO:0006355
Prci252g0004 237 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Prci252g0004 237 PRINTS Ethylene responsive element binding protein signature 111 127 IPR001471 GO:0003700|GO:0006355
Prci252g0004 237 SMART rav1_2 88 151 IPR001471 GO:0003700|GO:0006355
Prci252g0004 237 FunFam Ethylene-responsive transcription factor 2 86 146 - -
Prci252g0004 237 MobiDBLite consensus disorder prediction 203 226 - -
Prci252g0004 237 ProSiteProfiles AP2/ERF domain profile. 88 145 IPR001471 GO:0003700|GO:0006355
Prci252g0004 237 Gene3D AP2/ERF domain 88 147 IPR036955 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci252g0004 1 214 AP2-EREBP Transcription Factor Family AT3G16770 45.200 2.40e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci252g0004 AP2 2.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci252g0004 K09286 - tcc:18603555 217.624