Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci252g0003 ATGTGTGGTGGAGCTATCATTTCCGATTTCATTGCCGTCAAGCGAGGCCGGAAACTCACCGCCGGTGACTTCTGGTCCGAGCTCGACCCTTTCTCCGACCTCCTTGGCTTCGATATTAACGCCGGTTCTGCCAAAAACCAAACGCCTCGGAAACTCCCTCAAGTCCCAATCAGTAAAGGCGAGAAGAAGGAGAAGAAAAGCGTTAGCGCAGAGAAAGCAGGCGGGAAGAGCACTGGACAGAGAGCACGCAAGAACGTGTACAGAGGCATAAGGCAGAGGCCGTGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGCGTCCGGGTGTGGCTCGGCACCTACAACACCGCCGAAGAAGCCGCCAGAGCCTACGACGAAGCGGCCAAGCGCATCCGCGGCGACAAAGCCAAGCTCAACTTCCCGGCCGCTACCGCCCCGAGTCCTCAGCCGGAGCGACCCGCCAAGAAGCGGTGCCTGAGCCCAGAGCTGAGTGACGGGAGCAACCATCCAACCGGGCCACCGACGCCGTACCAGGCGGATCTGGAGCTGAAGCAGCAGATATCAGACCTGGAGTCGCTGCTGGGACTGGAGCCGGAGGAAGAGACGAGCGAGCAGCAGCAGGCGGTGAGCGGAGGAGGAGCAGCGACGGCGACGAGTGGGCGGAGTCGGTGGAGATGTGGATGCTGGACGACGTCGTGTTGA 708 0.6144 MCGGAIISDFIAVKRGRKLTAGDFWSELDPFSDLLGFDINAGSAKNQTPRKLPQVPISKGEKKEKKSVSAEKAGGKSTGQRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPAATAPSPQPERPAKKRCLSPELSDGSNHPTGPPTPYQADLELKQQISDLESLLGLEPEEETSEQQQAVSGGGAATATSGRSRWRCGCWTTSC 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci252g0003 235 MobiDBLite consensus disorder prediction 43 85 - -
Prci252g0003 235 MobiDBLite consensus disorder prediction 201 224 - -
Prci252g0003 235 ProSiteProfiles AP2/ERF domain profile. 86 143 IPR001471 GO:0003700|GO:0006355
Prci252g0003 235 MobiDBLite consensus disorder prediction 56 71 - -
Prci252g0003 235 SUPERFAMILY DNA-binding domain 86 144 IPR016177 GO:0003677
Prci252g0003 235 Gene3D AP2/ERF domain 86 145 IPR036955 GO:0003700|GO:0006355
Prci252g0003 235 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Prci252g0003 235 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Prci252g0003 235 MobiDBLite consensus disorder prediction 197 224 - -
Prci252g0003 235 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Prci252g0003 235 PANTHER DNA-BINDING DOMAIN 63 193 IPR044808 GO:0003700|GO:0009873
Prci252g0003 235 SMART rav1_2 86 149 IPR001471 GO:0003700|GO:0006355
Prci252g0003 235 MobiDBLite consensus disorder prediction 139 180 - -
Prci252g0003 235 CDD AP2 87 145 IPR001471 GO:0003700|GO:0006355
Prci252g0003 235 FunFam Ethylene-responsive transcription factor 2 84 144 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci252g0003 1 212 AP2-EREBP Transcription Factor Family AT3G16770 45.161 1.37e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci252g0003 AP2 2.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci252g0003 K09286 - tcc:18603555 216.853