Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci24g0001 ATGTCTGAGTTGCAAAATATTGATTTGACTGAAAATAATTTGTGGGGAGGCATTCCTTCTAATATATGTCATGGACTTTCAAAATTACAAATTTTGTATCTTGGACACAACAAATTATTTGGAGCTATACCATCTAGTTGGATACAATGCAAGCAACTCAAAGAGTTATACTTAGAAGAAAACTCGTTCACAGGAGATCTACCAGCAGACATTGGAAACTTAACTATGCTTCAAACATTAAGTCTTGGTTACAATAACTTAAAAGGTAGCCTTCCAACAAATTATGGGAATCTCACTAATCTGTATAAACTATCTTTAGAAGAAAACATTTTGACTGGAACGATTCCAACAACAATTAATAGTTTACAAGATCTTCAGTATTTGAGTCTTGAAGGCAATGAGCTACATGGTGCAATCATTGAAGAGCTTTGTGGAATCACAAGACTTGCCTTTTTATATCTAAGTGGGAACAAGTTTTCTGGATCAATACCACATTGCATAGGAAATGTTACCTCCTTACGAGAACTTCACTTGGACACTAATAAGTTAACTTCAGAGATACCCTCTTCTTTTTGGAATTTGAAGGACATATTGATCGTGAACTTGTCTTCCAATAGTTTAGTTGGAAATCTTTCATTCAATATTGGAACCTTAAAAGCTCTTACGTCATTGGACTTGTCAAGAAATCATATTTCAGGTATCATTCCTTCAACCATGGGTGGTTTGCTGACGTTGCAAATTCTTTCCTTAGCACATAACAATTTGCAAGGAAATATTCCTGAATCATTTGAAAATATTAAAAGTTTAATGAATTTGGACCTTTCCCACAATAATCTGTCTGGTGAGATTCCTATATCTTTGGAGTCACTTGTTGATCTAAAGTATATCAATCTCTCATTTAACAAACTACGAGGAGAGATTCCAAGTGGAGGTGTTTTCAAAAATTTGACTGCTGAATCTTTCTTGATGAATAAAGCTCTTTGTGGTAAACAAGAACTAAAAGTACCTCCTTGTAGAAAAGGAAAAAGGTCAGTCGCAAAATCACTTTTATTCAAGTGCACATTACCCGTATTTGTGTCAATAATTTTGATTGTTTTAGGCATTCTCCTTTTAAAACAAAGAGAGCCAAATTCAAGGGATTGTTTGGAAAGGGATTCATCAATTTTAGGAGTGCCAAGAAGGATTTCTTATTTTGAAATTCTACAGGCAACTAATGGATTTGATGAGAGTAACTTTCTTGGAAAGGGGAGTTATGGTGATGTGTTCAAAGGAAAGCTTTTGAATGGGATGATGGTTGCAATTAAAGTATTTAATTTTGATTCTGAAAAAATGTCAAGGAGCTTTGAGGTGGAATGCAACACAATGCGTAATGTGCGCCATTATAATTTGGTGAAGATCATAAGTAGTTGTTCCAATGTTGATTTCAAGTGTTTAATAATGGAGTTCATGCCTAATGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTGGATTTTCTACAAAGGCTGAATATAATGATAAATGTAGCATATGCTTTGGAGTATCTCCATCATGGCTTGTCAATACCTGTAGTTCATTGTGATTTGAAGCCAAGTAACATTTTGTTGGATGGTGATATGGTTGCTCATGTGAGTGACTTTGGGATTTCCAAACTTTTAGATGAAGGGCAATCTAAAACACATACAGAGACGATACCTACTATTGGATATATTGCACCTGAATATGGATTTGCTGGAGTTGTTTCAACGAAAATAGATGTGTACAGCTTTGGAATTATATTAATAGAAGTGTTCACAAGAAAAAAACCAACAGAAGACATGTTTGCCTCAGGATTAGACTTGAAGAGTTGGGTAAGTGATTCAATACCACATAAAATAATTAATGTCATAGATTCCAATTTATTGCAGGGAGATGAAGAACATATTGGTGATATATTGACTTCTACATCCTGCATTTTGGAATTGGCATTAAATTGTTGCACTGATTTTCCTACAATGCGAAGCAATATGACAAATGTTGTAGTATCTTTAAACAAGATCAAGAACTTGATTATGGAAAGGCAAAATCATCAACATCATTGA 2088 0.341 MSELQNIDLTENNLWGGIPSNICHGLSKLQILYLGHNKLFGAIPSSWIQCKQLKELYLEENSFTGDLPADIGNLTMLQTLSLGYNNLKGSLPTNYGNLTNLYKLSLEENILTGTIPTTINSLQDLQYLSLEGNELHGAIIEELCGITRLAFLYLSGNKFSGSIPHCIGNVTSLRELHLDTNKLTSEIPSSFWNLKDILIVNLSSNSLVGNLSFNIGTLKALTSLDLSRNHISGIIPSTMGGLLTLQILSLAHNNLQGNIPESFENIKSLMNLDLSHNNLSGEIPISLESLVDLKYINLSFNKLRGEIPSGGVFKNLTAESFLMNKALCGKQELKVPPCRKGKRSVAKSLLFKCTLPVFVSIILIVLGILLLKQREPNSRDCLERDSSILGVPRRISYFEILQATNGFDESNFLGKGSYGDVFKGKLLNGMMVAIKVFNFDSEKMSRSFEVECNTMRNVRHYNLVKIISSCSNVDFKCLIMEFMPNGSLEKWLYSHNYCLDFLQRLNIMINVAYALEYLHHGLSIPVVHCDLKPSNILLDGDMVAHVSDFGISKLLDEGQSKTHTETIPTIGYIAPEYGFAGVVSTKIDVYSFGIILIEVFTRKKPTEDMFASGLDLKSWVSDSIPHKIINVIDSNLLQGDEEHIGDILTSTSCILELALNCCTDFPTMRSNMTNVVVSLNKIKNLIMERQNHQHH 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci24g0001 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Prci24g0001 695 SMART LRR_sd22_2 290 318 - -
Prci24g0001 695 SMART LRR_sd22_2 74 100 - -
Prci24g0001 695 SMART LRR_sd22_2 26 58 - -
Prci24g0001 695 SMART LRR_sd22_2 218 236 - -
Prci24g0001 695 SMART LRR_sd22_2 122 145 - -
Prci24g0001 695 SMART LRR_sd22_2 242 268 - -
Prci24g0001 695 ProSitePatterns Protein kinases ATP-binding region signature. 413 435 IPR017441 GO:0005524
Prci24g0001 695 FunFam Serine-threonine protein kinase plant-type 389 482 - -
Prci24g0001 695 SMART LRR_typ_2 26 50 IPR003591 -
Prci24g0001 695 SMART LRR_typ_2 1 25 IPR003591 -
Prci24g0001 695 SMART LRR_typ_2 74 98 IPR003591 -
Prci24g0001 695 SMART LRR_typ_2 218 241 IPR003591 -
Prci24g0001 695 SMART LRR_typ_2 170 193 IPR003591 -
Prci24g0001 695 SMART LRR_typ_2 290 315 IPR003591 -
Prci24g0001 695 SMART LRR_typ_2 242 265 IPR003591 -
Prci24g0001 695 Pfam Leucine Rich Repeat 221 239 IPR001611 GO:0005515
Prci24g0001 695 PRINTS Leucine-rich repeat signature 221 234 - -
Prci24g0001 695 PRINTS Leucine-rich repeat signature 266 279 - -
Prci24g0001 695 Gene3D Phosphorylase Kinase; domain 1 390 482 - -
Prci24g0001 695 Gene3D Ribonuclease Inhibitor 1 340 IPR032675 -
Prci24g0001 695 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 483 692 - -
Prci24g0001 695 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 49 342 - -
Prci24g0001 695 PANTHER OS04G0122200 PROTEIN 2 94 - -
Prci24g0001 695 ProSiteProfiles Leucine-rich repeat profile. 268 291 IPR001611 GO:0005515
Prci24g0001 695 SUPERFAMILY Protein kinase-like (PK-like) 387 679 IPR011009 -
Prci24g0001 695 SMART serkin_6 407 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci24g0001 695 Pfam Protein kinase domain 409 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci24g0001 695 ProSiteProfiles Protein kinase domain profile. 407 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci24g0001 695 Pfam Leucine rich repeat 99 159 IPR001611 GO:0005515
Prci24g0001 695 Pfam Leucine rich repeat 28 87 IPR001611 GO:0005515
Prci24g0001 695 Pfam Leucine rich repeat 244 303 IPR001611 GO:0005515
Prci24g0001 695 SUPERFAMILY L domain-like 2 331 - -
Prci24g0001 695 Gene3D Transferase(Phosphotransferase) domain 1 483 695 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci24g0001 1 683 Receptor kinase-like Gene Family AT3G47570 38.567 8.81e-148 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci24g0001 Pkinase 6.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci24g0001 - K13420 qsa:O6P43_031964 779.245