Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci249g0002 ATGGAGGCCTCATGGCAGCAAAGTGTTACATACTCCCTCAACACCATCTTCCTCCTCTTTTCTGCCTACCTCGTCTTCGTCATGCAAATCGGCTTCGCCATGCTCTGTGCCGGCTCTGTCAGAGCTAAGAATGCCGTCAACATTATGCTCACCAATGTCGTCGACGCCGTCGTTGGAAGCATCTCCTTCTACCTCTTCGGCTTCGCATTTGCCTTCGGCGACGGCGCCAGTTCTAACCCTTTCATCGGTACTAATCTGTTTGCTCTCGCTAGCATTCCTAATGGCACTTACGATTACAGTTTCTATCTTTACCAATGGGCTTTTGCAATAGCCGTAGCAGGCATCACAAGTGGGTCTATCGCTGAGAGAGCCCAGTTCAGTGCTTATCTCGTTTTCAGTTTTTTTCTTACGGGCTTTGTTTACCCAGTTGTGGTCCATTGGGTCTGGTCCTCCGACGGCTGGCTCAGTACTGGGTCGAGCCATTTGTTTCTGGGGTCAGGTGCTATTGATTTCGCTGGGAGCGGAGTGGTGCATCTGGTTGGTGCTGTAGCTGGTTTCTGGGGTTCGGTCATATTAGGCCCTCGGGTGGGCCGGTTTGACGCGTTCGGCAACCCAGTGCCGTTCCGAGGCCACAATGCAAGTCTCGTGGTACTTGGAACGTTCCTTTTGTGGTTTGGGTGGTTTGGGTTTAATCCCGGTTCATTTGATAAGATTCTTGTATCGTATCCTGACACATCCGACGAGGGTAATTGGACCTCCATCAGTCGCACTGCGGTTGTGACTACATTAGCCGGTTCAACAGCCGGAATCATAACCTTGTTTGGTCGGCGATTAATAATCGGCCACTGGGATGCAATAGATGTTTGCAACGGGTTGCTCGGGGGGTTTGTTGCTATCACTTCCGGATGCTCGGTTGTTGAGCCATGGGCCGCCATTATTTGTGGGTTTGTTTCAGCTTGGGTCCTGATTGGGCTCAATATCTTGGCCCTGAAATTGAACTATGATGACCCATTAGAGGCGGCCCAATTACATGGTGGGTGTGGGGCTTGGGGTTTGATATTCACGGGATTGTTTGCCAAGGAAGAGTTTGTGATTCAAGTCTATGATAAAGGCGTGACTGGGGCCAGACCCTATGGGCTTCTATTAGGAGGTGGATGGGCTTTAGTTGGAGCCCAAATTATTGAATTGTTATCTATATTGGGTTGGGTTAGTGTTACCATGGGCCCTTTGTTCTATGCCTTACACAAGCTTAAGCTGTTAAGAATCTCCAAAGACGATGAGGTTACCGGCCTTGATATCTCAACCCATGGAGGTTCTGCTTATTCTCATCAAGAGGAAAACTTCCCTCTATCTTACGCCGATTATATTCGCCTTAGAGATCGTAATCTTGATTGA 1395 0.4925 MEASWQQSVTYSLNTIFLLFSAYLVFVMQIGFAMLCAGSVRAKNAVNIMLTNVVDAVVGSISFYLFGFAFAFGDGASSNPFIGTNLFALASIPNGTYDYSFYLYQWAFAIAVAGITSGSIAERAQFSAYLVFSFFLTGFVYPVVVHWVWSSDGWLSTGSSHLFLGSGAIDFAGSGVVHLVGAVAGFWGSVILGPRVGRFDAFGNPVPFRGHNASLVVLGTFLLWFGWFGFNPGSFDKILVSYPDTSDEGNWTSISRTAVVTTLAGSTAGIITLFGRRLIIGHWDAIDVCNGLLGGFVAITSGCSVVEPWAAIICGFVSAWVLIGLNILALKLNYDDPLEAAQLHGGCGAWGLIFTGLFAKEEFVIQVYDKGVTGGXRPYGLLLGGGWALVGAQIIELLSILGWVSVTMGPLFYALHKLKLLRISKDDEVTGLDISTHGGSAYSHQEENFPLSYADYIRLRDRNLD 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci249g0002 465 FunFam Ammonium transporter 1 454 - -
Prci249g0002 465 Pfam Ammonium Transporter Family 17 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Prci249g0002 465 ProSitePatterns Ammonium transporters signature. 170 195 IPR018047 GO:0008519|GO:0016020|GO:0072488
Prci249g0002 465 PANTHER AMMONIUM TRANSPORTER 10 444 - -
Prci249g0002 465 Gene3D Ammonium transporter AmtB like domains 2 455 IPR029020 -
Prci249g0002 465 NCBIfam ammonium transporter 14 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Prci249g0002 465 SUPERFAMILY Ammonium transporter 11 423 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci249g0002 7 448 Inorganic Solute Cotransporters AT1G64780 65.848 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci249g0002 K03320 - pvy:116129597 769.615