Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci23g0001 ATGTCTTTGTCATCAAACTCCTTAAAAGGAGATATTCCAAATGAAATTGCCAATCTTTCAAATCTTAAAATTATGTCTTTGGCTCAAAATCAACTCATTGGCTACATACCTAGAAGCATTGGAAGTTTGGTTTCGCTTCAGGAATTAGATCTTGGTTTCAATAATTTACAAGGTGATATACCAAATGGTATTGGAAAATTGGATATGCTTCAAGTGCTAGGTCTTGAACATAATAATTTACAAGGTGATATACCTGAAGGAATTGGGAAATTGGATATGCTTCAAGAGCTATATCTTGATCATAATAATTTACAAGGAAGCATTCCCGAACAGATTGGTAATCTTAAAAGTCTAAAAATTTTATTTTTAGACACCCATATGTTTTCAAGCCAAATACCATCAACTATCTTTAATATATCTGGGTTGCAAGAGATTGATTTTAGTTGGAATAATTTGTCGGGAGGCATTCCCTCAAATATATGTCATGGCCTTCCAAATTTACAAGCTTTGGATCTTCAAGCCAACAAATTATTTGGAGCTATACCATCTGATTGGACACAATGCAAGGAACTCAAAGAGTTACAATTAGGAGACAACTTCTTCACAGGAAATATTCCTCAAACAATTGGTGGCCTCACAAACTTGAAAATTATATATCTACGTGCTAACAAGTTGTCTGGCCAGATACCAAGGAGTATTGAAAATTTGACAAAACTTCAAGAGCTAGACCTTAGTGGAAATAACATTGAAGGAAATATTCCTCAAACAATTGGTGACCTATCAAACTTGAAAATTATATCTATAGGTGCTAACAAGTTGTCCGGCCAAATACCAAGGAATACTGGAAAGTTGACAAAACTTCAAGAGCTAGACCTTAGTGGAAATAACATTGAAGGTCATATACCCAAAAGTATTGGAAACTTGACCATGCTTCAAGATTTAAATGTGAATTCCAATAGCTTGGAAGGTTTAATACCTATGGAAATAGGAAATCTCCATAAGCTTGAGATCTTAGATTTGTGGAATAACAAGTTGAGGGGATCTATTCCGTCCAACATTTTTAACATTTCAACTTTGAGATACTTAAATCTTGGAAGCAATTCTATAACTGGCAATCTTCCATCAAATTTCAGGAATCTCACTAGTTGCTATGAACTATCCTTGGAAGAAAATATTTTGACAGGATCAATTCCAAAAGTAATTGGTGGCTTACAAGATCTTCAATATTTGAGTCTTGAAGGATGGCCAAGGAGGATATCTTATTTTGAAATTCTAGAAGCAACTAATGGATTTGATGAGAGTAACTTTCTTGGAAAGGGGAGTTATGGTGATGTGTTCAAAGGAAAGCTTTTGAATGGGATGATGGTTGCAATTAAAGTATTTAATTTTGATTTTGAAAAAATGTCTAGGAGCTTTGAAGTGGAATGCAACACAATGCGTAATGTGCGCCATTATAATTTGGTGAAGATCATAAGTAGTTGTTCCAATGTTGATTTCAAGTGTTTGATCATGGAGTTCATGCCTAAAGGGAGCCTTGAAAAATGGTTATATTCTCATAATTATTGTTTGGATTTTCTACAAAGGCTGAATGTAATGATAAATGTAGCATCTACTTTGGAGTATCTCCATCATGACTTGTCAACACCGATAGTTCATTGTGATTTAAAGCCAAGTAACATTTTGTTAGATGATGATATGGTTGCTCATGTGAGTGACTTTGGGATTTCCAAACTTTTAGATGAAGGACAATCAAAAACACATACAGAGATGATACCTACAATTGGATATGTTTCACCTG 1798 0.342 MSLSSNSLKGDIPNEIANLSNLKIMSLAQNQLIGYIPRSIGSLVSLQELDLGFNNLQGDIPNGIGKLDMLQVLGLEHNNLQGDIPEGIGKLDMLQELYLDHNNLQGSIPEQIGNLKSLKILFLDTHMFSSQIPSTIFNISGLQEIDFSWNNLSGGIPSNICHGLPNLQALDLQANKLFGAIPSDWTQCKELKELQLGDNFFTGNIPQTIGGLTNLKIIYLRANKLSGQIPRSIENLTKLQELDLSGNNIEGNIPQTIGDLSNLKIISIGANKLSGQIPRNTGKLTKLQELDLSGNNIEGHIPKSIGNLTMLQDLNVNSNSLEGLIPMEIGNLHKLEILDLWNNKLRGSIPSNIFNISTLRYLNLGSNSITGNLPSNFRNLTSCYELSLEENILTGSIPKVIGGLQDLQYLSLEGWPRRISYFEILEATNGFDESNFLGKGSYGDVFKGKLLNGMMVAIKVFNFDFEKMSRSFEVECNTMRNVRHYNLVKIISSCSNVDFKCLIMEFMPKGSLEKWLYSHNYCLDFLQRLNVMINVASTLEYLHHDLSTPIVHCDLKPSNILLDDDMVAHVSDFGISKLLDEGQSKTHTEMIPTIGYVSP 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci23g0001 599 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 160 - -
Prci23g0001 599 Gene3D Transferase(Phosphotransferase) domain 1 507 599 - -
Prci23g0001 599 FunFam Piriformospora indica-insensitive protein 2 161 250 - -
Prci23g0001 599 Gene3D Ribonuclease Inhibitor 140 214 IPR032675 -
Prci23g0001 599 Gene3D Ribonuclease Inhibitor 215 283 IPR032675 -
Prci23g0001 599 SMART LRR_sd22_2 284 310 - -
Prci23g0001 599 SMART LRR_sd22_2 164 193 - -
Prci23g0001 599 SMART LRR_sd22_2 332 358 - -
Prci23g0001 599 SMART LRR_sd22_2 260 275 - -
Prci23g0001 599 SMART LRR_sd22_2 212 238 - -
Prci23g0001 599 SMART LRR_sd22_2 19 38 - -
Prci23g0001 599 SMART LRR_sd22_2 91 117 - -
Prci23g0001 599 SMART LRR_sd22_2 43 77 - -
Prci23g0001 599 SMART serkin_6 431 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci23g0001 599 ProSiteProfiles Protein kinase domain profile. 431 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci23g0001 599 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 164 340 - -
Prci23g0001 599 PRINTS Leucine-rich repeat signature 239 252 - -
Prci23g0001 599 PRINTS Leucine-rich repeat signature 284 297 - -
Prci23g0001 599 SUPERFAMILY L domain-like 130 419 - -
Prci23g0001 599 Gene3D Ribonuclease Inhibitor 284 414 IPR032675 -
Prci23g0001 599 Gene3D Ribonuclease Inhibitor 1 139 IPR032675 -
Prci23g0001 599 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 251 415 - -
Prci23g0001 599 Pfam Protein kinase domain 433 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci23g0001 599 FunFam Os07g0541700 protein 507 594 - -
Prci23g0001 599 SUPERFAMILY Protein kinase-like (PK-like) 410 599 IPR011009 -
Prci23g0001 599 ProSitePatterns Protein kinases ATP-binding region signature. 437 459 IPR017441 GO:0005524
Prci23g0001 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Prci23g0001 599 Gene3D Phosphorylase Kinase; domain 1 415 506 - -
Prci23g0001 599 Pfam Leucine Rich Repeat 142 162 IPR001611 GO:0005515
Prci23g0001 599 ProSiteProfiles Leucine-rich repeat profile. 286 308 IPR001611 GO:0005515
Prci23g0001 599 SUPERFAMILY L domain-like 2 191 - -
Prci23g0001 599 SMART LRR_typ_2 164 188 IPR003591 -
Prci23g0001 599 SMART LRR_typ_2 236 260 IPR003591 -
Prci23g0001 599 SMART LRR_typ_2 43 67 IPR003591 -
Prci23g0001 599 SMART LRR_typ_2 91 115 IPR003591 -
Prci23g0001 599 SMART LRR_typ_2 332 356 IPR003591 -
Prci23g0001 599 SMART LRR_typ_2 212 235 IPR003591 -
Prci23g0001 599 SMART LRR_typ_2 284 308 IPR003591 -
Prci23g0001 599 SMART LRR_typ_2 139 163 IPR003591 -
Prci23g0001 599 Pfam Leucine rich repeat 2 56 IPR001611 GO:0005515
Prci23g0001 599 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Prci23g0001 599 Pfam Leucine rich repeat 70 124 IPR001611 GO:0005515
Prci23g0001 599 Pfam Leucine rich repeat 358 414 IPR001611 GO:0005515
Prci23g0001 599 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Prci23g0001 599 FunFam Serine-threonine protein kinase plant-type 413 506 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci23g0001 1 599 Receptor kinase-like Gene Family AT3G47570 33.428 9.82e-102 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci23g0001 Pkinase 8.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci23g0001 - - pcin:129294940 1198.34