Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci231g0003 ATGATCCCTAATCGTTCTCCTTTTGAATCAGTTCAACATCACCTGATTGAAGATGATCCTTATTCCTCCACGACTCTCATGAATAATGGCTTCTTCGCGGCGGCCGGCAACCCTACTTCCAACTTGAACTGCTACACGGCTTCGCTGGATCATGGTGCTAGTAGCTCTACTGGATCTGTGGCGCGTGAGGAGAACGCGCCACCTACATGGAGGAATCTGAACTACGACGCTGCTTTGCCGGAGGAGGGTGTTAGTGACTCCGGTGGTATGTCATTTTCGGGCGGGAATAATGACGACGGTATGAATTCAGGTGGTTATGATGATGATAAGGTTACCGGTAATAACACAGGATCTGTCGCATGTGAAAAGAACGCGCCGCCTCGATTGAGGAATTACCGAGGCGTGAGGCGGCGGCCATGGGGTAAGTTCGCAGCGGAGATCCGGGACCCGAAGAGGAACGGCGCAAGGACATGGCTCGGAACCTATGAGAGCGAGGAGGACGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCATGGCAGAAAAGCCAAGCTCAATTTCCCACACCTTATTGGATCGGAGTCGCCGCCGGTGCCGGCAAGAGTAGTCATTGGAGAGAAGCAGCGCAGCTCGCGGGAACCTTCGTCGCCGTCTAACTGTACGGCTGAGGATGATGGATCTCAAGGATCAAGTAAGAAGAAAAGCCTGGCAGGTCTATTGAACAAGTTAGCAACAAATAGAAGTCATATCAGATTCTGA 762 0.5157 MIPNRSPFESVQHHLIEDDPYSSTTLMNNGFFAAAGNPTSNLNCYTASLDHGASSSTGSVAREENAPPTWRNLNYDAALPEEGVSDSGGMSFSGGNNDDGMNSGGYDDDKVTGNNTGSVACEKNAPPRLRNYRGVRRRPWGKFAAEIRDPKRNGARTWLGTYESEEDAALAYDRAAFKMHGRKAKLNFPHLIGSESPPVPARVVIGEKQRSSREPSSPSNCTAEDDGSQGSSKKKSLAGLLNKLATNRSHIRF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci231g0003 253 FunFam Ethylene-responsive transcription factor 2 130 190 - -
Prci231g0003 253 Pfam AP2 domain 131 181 IPR001471 GO:0003700|GO:0006355
Prci231g0003 253 MobiDBLite consensus disorder prediction 210 236 - -
Prci231g0003 253 Gene3D AP2/ERF domain 130 190 IPR036955 GO:0003700|GO:0006355
Prci231g0003 253 PRINTS Ethylene responsive element binding protein signature 132 143 IPR001471 GO:0003700|GO:0006355
Prci231g0003 253 PRINTS Ethylene responsive element binding protein signature 171 191 IPR001471 GO:0003700|GO:0006355
Prci231g0003 253 CDD AP2 131 191 IPR001471 GO:0003700|GO:0006355
Prci231g0003 253 SMART rav1_2 131 195 IPR001471 GO:0003700|GO:0006355
Prci231g0003 253 PANTHER DNA-BINDING DOMAIN 103 229 IPR044808 GO:0003700|GO:0009873
Prci231g0003 253 MobiDBLite consensus disorder prediction 84 110 - -
Prci231g0003 253 ProSiteProfiles AP2/ERF domain profile. 131 189 IPR001471 GO:0003700|GO:0006355
Prci231g0003 253 SUPERFAMILY DNA-binding domain 131 190 IPR016177 GO:0003677
Prci231g0003 253 MobiDBLite consensus disorder prediction 205 241 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci231g0003 98 224 AP2-EREBP Transcription Factor Family AT2G44840 51.701 3.07e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci231g0003 AP2 2.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci231g0003 K09286 - pcin:129296372 215.698