Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci231g0002 ATGATCCCTAATCGTTCTCCTTTTGAATCAGTTCAACATCACCTGATTGAAGATGATCCTTATTCCTCCACGACTCTCATGAATAATGGCTTCTTCGCGGCGGCCGGCAACCCTACTTCCAACTTGAACTGCTACACGGCTTCGCTGGATCATGGATCTGTGGCGCGTGAGGAGAACGCGCCACCTACATGGAGGAATCTGAACTACGACGCTGCTTTGCCGGAGGAGGGTGTTAGTGACTCCGGTGGTATGTCATTTTCGGGCGGGAATAATGACGACGGTATGAATTCAGGTGGTTATGATGATGATAAGGTTACCGGTAATAACACAGGATCTGTCGCATGTGAAAAGAACGCGCCGCCTCGATTGAGGAATTACCGAGGCGTGAGGCGGCGGCCATGGGGTAAGTTCGCAGCGGAGATCCGGGACCCGAAGAGGAACGGCGCAAGGACATGGCTCGGAACCTATGAGAGCGAGGAGGACGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCATGGCAGAAAAGCCAAGCTCAATTTCCCACACCTTATTGGATCGGAGTCGCCGCCGGTGCCGGCAAGAGTAGTCATTGGAGAGAAGCAGCGCAGCTCGCGGGAACCTTCGTCGCCGTCTAACTGTACGGCTGAGGATGATGGATCTCAAGGATCAAGTAAGAAGAAAAGCCTGGCAGGTCTATTGAACAAGTTAGCAACAAATAGAAGTCATATCAGATTCTGA 744 0.5161 MIPNRSPFESVQHHLIEDDPYSSTTLMNNGFFAAAGNPTSNLNCYTASLDHGSVAREENAPPTWRNLNYDAALPEEGVSDSGGMSFSGGNNDDGMNSGGYDDDKVTGNNTGSVACEKNAPPRLRNYRGVRRRPWGKFAAEIRDPKRNGARTWLGTYESEEDAALAYDRAAFKMHGRKAKLNFPHLIGSESPPVPARVVIGEKQRSSREPSSPSNCTAEDDGSQGSSKKKSLAGLLNKLATNRSHIRF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci231g0002 247 Gene3D AP2/ERF domain 124 184 IPR036955 GO:0003700|GO:0006355
Prci231g0002 247 SUPERFAMILY DNA-binding domain 125 184 IPR016177 GO:0003677
Prci231g0002 247 Pfam AP2 domain 125 175 IPR001471 GO:0003700|GO:0006355
Prci231g0002 247 CDD AP2 125 185 IPR001471 GO:0003700|GO:0006355
Prci231g0002 247 PRINTS Ethylene responsive element binding protein signature 165 185 IPR001471 GO:0003700|GO:0006355
Prci231g0002 247 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
Prci231g0002 247 MobiDBLite consensus disorder prediction 204 230 - -
Prci231g0002 247 FunFam Ethylene-responsive transcription factor 2 124 184 - -
Prci231g0002 247 SMART rav1_2 125 189 IPR001471 GO:0003700|GO:0006355
Prci231g0002 247 MobiDBLite consensus disorder prediction 199 235 - -
Prci231g0002 247 ProSiteProfiles AP2/ERF domain profile. 125 183 IPR001471 GO:0003700|GO:0006355
Prci231g0002 247 PANTHER DNA-BINDING DOMAIN 104 223 IPR044808 GO:0003700|GO:0009873
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci231g0002 92 218 AP2-EREBP Transcription Factor Family AT2G44840 51.701 3.28e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci231g0002 AP2 2.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci231g0002 K09286 - pcin:129296372 215.698