Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci22g0011 ATGGCTGCTTCAAACATTCATTATCCTATAAAGAGCAAATTAGTGAAGCCAGTTGAAGCCAACAAAAAGGGAGCTTGGACACCTGAAGAAGATACCAAACTAGCTGAAGCCATCGCAGTTCATGGCGCCAAAAGGTGGAAATCGATTGCAGCTAAAGCAGGTCTTGATAGGAATGGTAAGAGTTGCAGGCTAAGATGGTTGAACTATCTGAGACCAAACATCAAGAGGGGGAACATATCAGACCAAGAAGAGGATTTGATATTTCGTCTTCACAAACTGGTCGGAAACAGGTGGTCTTTGATTGCTGGAAGGTTACCAGGACGAACAGACAATGAAATAAAGAACTACTGGAATTCTCATTTGAGCAAGAAAATGAAGCAGAGAGAGAAGAAGAAGGAGAACCAAATAGAGTGTTCATCATCGACAAGAGATCATCATGAGAAAGACGAAAGACTAGTAGAAGTGATGGCGGAAGAGAGTAATAATAATGATATTCCTGCAGAGGCAACATTGGAGACAACAGTGGAAGAAGAGAATCCAAATGAAGAAGAGGATGAACAATATTCGTGCAAGTTCTTCAATTTTGATGAGAATGATGGGTTGTTCGATTTTTTGGATGAAGGTCCATTGAATTTGGAGTGGCTTAGCAAATTCCTCGAATTCAATGCGTGA 672 0.4077 MAASNIHYPIKSKLVKPVEANKKGAWTPEEDTKLAEAIAVHGAKRWKSIAAKAGLDRNGKSCRLRWLNYLRPNIKRGNISDQEEDLIFRLHKLVGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMKQREKKKENQIECSSSTRDHHEKDERLVEVMAEESNNNDIPAEATLETTVEEENPNEEEDEQYSCKFFNFDENDGLFDFLDEGPLNLEWLSKFLEFNA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci22g0011 223 Gene3D - 15 76 - -
Prci22g0011 223 FunFam MYB-related transcription factor 22 75 - -
Prci22g0011 223 SUPERFAMILY Homeodomain-like 22 117 IPR009057 -
Prci22g0011 223 MobiDBLite consensus disorder prediction 128 148 - -
Prci22g0011 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 125 IPR017930 -
Prci22g0011 223 Gene3D - 80 154 - -
Prci22g0011 223 CDD SANT 80 121 IPR001005 -
Prci22g0011 223 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Prci22g0011 223 Pfam Myb-like DNA-binding domain 76 121 IPR001005 -
Prci22g0011 223 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Prci22g0011 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 74 IPR017930 -
Prci22g0011 223 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 19 177 - -
Prci22g0011 223 SMART sant 75 123 IPR001005 -
Prci22g0011 223 SMART sant 22 72 IPR001005 -
Prci22g0011 223 CDD SANT 25 70 IPR001005 -
Prci22g0011 223 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci22g0011 22 144 MYB Transcription Factor Family AT5G52600 59.350 2.74e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci22g0011 Myb_DNA-binding 1.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci22g0011 K09422 - cave:132188282 231.876