Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci22g0010 ATGGCTTGTTGTAGGTCCCATGTTTGTATACAGAGAAAAGTGAAGAAGCAATTCGAAGCTGACACTACAAATTTGCCTATCCGCAAGGGAGCTTGGACTCAACAAGAAGATTCAAAACTAGCTCAGGCTATTGCACTTCATGGACCTCAAAGGTGGAACTTCGTTGCTGCTAAAGCAGGTGTTAATAGGAGTTGCAGGAGTTGCAGGCAAAGGTGGTTGAATTATCTGAGGCCTGATATCAAGAGAGGGAACATATCAGATGAGGAAGAGGATTTGATAATTCGCCTTCATAAACTCCTTGGAAACAGGTGGTCCTTAATTGCGGGAAGACTACCAGGACGAACAGATAATGAAATAAAAAATTATTGGAACTCTCATTTGTGCAAGAAGGTGAAGCATAGAGAGAAGCAAACTGGTCTGTGCCCAGAAAGAGAAGGAGATCAACAAAAAGTGATGATGGTAAAAGAAATTAAGGTTCATATTGCTGATGAGGAAGAAGAGAGAACAAAAGAAGAAGAGAATTCAAATAACGAAGAAGGTCATGAAGAAGAAGATTCATCATCAAAGCTTGATTTTGATGTGGATGAGTTCTTTAATTTCTCCGAAGAGAACTCATCACTGAATCTGGAGTGGCTTAGCAAATTCCTTAATGATGATTCAACATAG 666 0.3979 MACCRSHVCIQRKVKKQFEADTTNLPIRKGAWTQQEDSKLAQAIALHGPQRWNFVAAKAGVNRSCRSCRQRWLNYLRPDIKRGNISDEEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVKHREKQTGLCPEREGDQQKVMMVKEIKVHIADEEEERTKEEENSNNEEGHEEEDSSSKLDFDVDEFFNFSEENSSLNLEWLSKFLNDDST 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci22g0010 221 SMART sant 28 78 IPR001005 -
Prci22g0010 221 SMART sant 81 129 IPR001005 -
Prci22g0010 221 ProSiteProfiles Myb-like domain profile. 24 76 IPR001005 -
Prci22g0010 221 CDD SANT 31 76 IPR001005 -
Prci22g0010 221 SUPERFAMILY Homeodomain-like 26 123 IPR009057 -
Prci22g0010 221 Coils Coil 154 181 - -
Prci22g0010 221 Gene3D - 29 81 - -
Prci22g0010 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 131 IPR017930 -
Prci22g0010 221 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 27 187 - -
Prci22g0010 221 ProSiteProfiles Myb-like domain profile. 77 127 IPR001005 -
Prci22g0010 221 FunFam Transcription factor TT2 85 156 - -
Prci22g0010 221 MobiDBLite consensus disorder prediction 160 189 - -
Prci22g0010 221 Gene3D - 85 189 - -
Prci22g0010 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 76 IPR017930 -
Prci22g0010 221 Pfam Myb-like DNA-binding domain 29 76 IPR001005 -
Prci22g0010 221 Pfam Myb-like DNA-binding domain 82 127 IPR001005 -
Prci22g0010 221 CDD SANT 86 127 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci22g0010 28 140 MYB Transcription Factor Family AT5G40330 57.522 1.65e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci22g0010 Myb_DNA-binding 9.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci22g0010 K09422 - cave:132188282 229.18