Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci22g0009 ATGTCTCATGTCTCTACAAAGAGCAAAGTGATGAAGCCATGGGAAGCCAACACAAATTTGCCGATCCGCAAGGGAGCTTGGACTCAAGAAGAAGATTCAAAACTAGCTCAGGCTATTGCTGTTCATGGACCTCAAAGGTGGAACTTCATTGCTGCCAAAGCAGGTGTCAAAAGGAGTAGCAAGAGTTGCAGGCTAAGGTGGTTGAATTACCTGCGCCCAAATATCAAGAGAGGAAACATATCAGACCAAGAAGAGGATTTGATACTTCGTCTTCATAAACTCCTCGGAAACAGGTGGTCCTTAATTGCGGGAAGACTACCAGGACGAACAGATAATGAAATAAAAAATTATTGGAACTCTCATTTGTGCAAGAAGGTGAAGAAGCAGAGAGAGAAGCAAATTGGCCTGTGCCCAGAAAGAGAAGAAGATAAACAAGAAGTGATCATTGTGGAAGAAATTAAGGTTCATATTTCTGATGAGGAAGAAGAGAGAACAAGAGGCGAGAATTCAAATAACGAGGAAGGTCATGAAGAAGAAGAGTCATCATCAAAGCTTGATTTTGATGTGGACGAGTTCTTCAATTTCTCCGAAGAGGACTCATCACTGAATTTGGAGTGGCTTAGCAAATTCCTTAATGATGATTCAACATAG 651 0.4147 MSHVSTKSKVMKPWEANTNLPIRKGAWTQEEDSKLAQAIAVHGPQRWNFIAAKAGVKRSSKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVKKQREKQIGLCPEREEDKQEVIIVEEIKVHISDEEEERTRGENSNNEEGHEEEESSSKLDFDVDEFFNFSEEDSSLNLEWLSKFLNDDST 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci22g0009 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 71 IPR017930 -
Prci22g0009 216 SUPERFAMILY Homeodomain-like 21 118 IPR009057 -
Prci22g0009 216 SMART sant 23 73 IPR001005 -
Prci22g0009 216 SMART sant 76 124 IPR001005 -
Prci22g0009 216 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 21 177 - -
Prci22g0009 216 CDD SANT 81 122 IPR001005 -
Prci22g0009 216 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Prci22g0009 216 Gene3D - 24 76 - -
Prci22g0009 216 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Prci22g0009 216 Pfam Myb-like DNA-binding domain 77 122 IPR001005 -
Prci22g0009 216 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Prci22g0009 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Prci22g0009 216 CDD SANT 26 71 IPR001005 -
Prci22g0009 216 Gene3D - 80 153 - -
Prci22g0009 216 FunFam Myb transcription factor 24 76 - -
Prci22g0009 216 MobiDBLite consensus disorder prediction 159 185 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci22g0009 23 126 MYB Transcription Factor Family AT5G40330 67.308 1.61e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci22g0009 Myb_DNA-binding 2.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci22g0009 K09422 - cave:132188282 235.343