Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci228g0001 ATGGACACAAAAACTAGTGCAAGAGCTCCCTCCGGACAGCATCAGAAGATAGCTGCTGAACAAACCGTAGAGGCAAAAGACATCCAACCTTCTCCATCTCTGGTTTCAAAATCAGGTAAACTTGAACTGCCTACTCCTGAAAGTTCATCAAAATCTGTGCAAAGCACATCAAAGAAGAATACGGTAGTAACTTCTGAAAGCAAGAAGACAGGAATTTTAAACCAAAAGGGGCTTGCTGATTCCTCGAATAATAAATGCGGTCTTGTTGCTTCCTCGTCTGTTCCTGAGCAGGCATGTGGAGGACCTGACCATGTTATTAATGAAAATAGGGGTTCGCAGGATAGTTCTATTGATCAAGAAAAGAAAACATCAGAGTATGGAAGTGTGAAGAACAGTTCAGTTTCAGCTAAAGTTAGTGATGGGGCAAGCAGTTTTGGAAAAACCAGTGTTAGTGCCAAAGTCAGTGATCGAGCTGATTATGTTGGGAGTGGTAAGAGCAGTATCTGCAGAGGAAGCACAAGTAGTGATGTCAGTGATGAGAGTACTTGTAGCAGCTTTAGTAGTGGCATAAACAAACCTCACAAGGCAAATGACATGAGATGGGAAGCCATCCAAGCTGTTCGAGCTAGAGATGGGGTACTGGGCTTAGGTCACTTTAGACTACTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTGTACCTCTCAGAGTTGAGTGGAACTAAATGCTATTTTGCAATGAAGGTAATGGACAAAGCATTACTAGCTAGTCGGAAGAAGTTGCTTCGTGCTCAGACTGAAAGGGAAATACTGCAGTCGCTGGACCATCCTTTTCTTCCAACATTGTATACCCATTTTGAGACAGAGAAGTTCTCGTGCTTGGTAATGGAATTCTGCCCTGGTGGAGACTTGCATACACTGAGGCAGAAACAATCAGGGAAGCATTTCACTGAGCAAGCAGTAAAATTTTATGTAGCTGAAGTCTTGCTTGCTTTGGAATACCTCCACATGCTTGGCATTGTCTATCGTGACCTCAAGCCAGAAAATGTCCTTGTGAGAGATGATGGACATATTATGCTCTCTGACTTTGATCTTTCTCTCCGCTGTGCTGTCAGTCCAACTCTTGTTAAAACCTCTTCAACGGAATTGGAGCCTTTAAGAAAGAATCCTGTTTATTGTGTCCAGCCGGCTTGTATTGAGCCACCTTCCTGCATCCAGCCATCTTGTGTTGCTCCTACAACATGCTTTTCACCCCGGCTCTTCTCTAGCAAATCAAAGAAGGATAGGAAACCTAAGACTGAAATTGGAAACCAAGTGACTCCATTACCTGAGCTCATTGCAGAGCCTACCGATGCTCGTTCTATGTCATTTGTTGGGACCCATGAGTATTTGGCACCTGAGATTATCAAGGGTGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGAATCTTTCTATTCGAACTGTTGTTTGGTAAAACTCCTTTTAAGGGATCTGGGAACCGAGCTACATTGTTTAATGTTGTAGGCCAGCCTCTCCGATTTCCGGACTCACCTGTTGTGAGTTTTGGAGCCAGGGATCTTATAAGGGGTTTGCTTGTAAAAGAACCACAGCACAGACTGGCATATAAGCGCGGGGCCACCGAGATAAAGCAACATCCCTTTTTCGAGGGTGTGAACTGGGCATTGATCCGATGTGCTACCCCACCAGAGATACCCAAGCCTGTAGAGTATGAGAAGATACCTTCCCCAGCATCTTCAGGCAGTGAAAAGGTGGTCCACCACATGTCGATTCCTGATAAAGGTTCTGATAAATATCTTGAATTTGATTTCTTCTAG 1842 0.4435 MDTKTSARAPSGQHQKIAAEQTVEAKDIQPSPSLVSKSGKLELPTPESSSKSVQSTSKKNTVVTSESKKTGILNQKGLADSSNNKCGLVASSSVPEQACGGPDHVINENRGSQDSSIDQEKKTSEYGSVKNSSVSAKVSDGASSFGKTSVSAKVSDRADYVGSGKSSICRGSTSSDVSDESTCSSFSSGINKPHKANDMRWEAIQAVRARDGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKALLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQSGKHFTEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSSTELEPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLFELLFGKTPFKGSGNRATLFNVVGQPLRFPDSPVVSFGARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPASSGSEKVVHHMSIPDKGSDKYLEFDFF 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci228g0001 613 ProSiteProfiles Protein kinase domain profile. 219 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci228g0001 613 FunFam serine/threonine-protein kinase D6PK-like 303 370 - -
Prci228g0001 613 MobiDBLite consensus disorder prediction 161 183 - -
Prci228g0001 613 MobiDBLite consensus disorder prediction 26 91 - -
Prci228g0001 613 Gene3D Phosphorylase Kinase; domain 1 217 302 - -
Prci228g0001 613 MobiDBLite consensus disorder prediction 1 18 - -
Prci228g0001 613 FunFam Serine/threonine-protein kinase D6PK-like 217 302 - -
Prci228g0001 613 SUPERFAMILY Protein kinase-like (PK-like) 198 586 IPR011009 -
Prci228g0001 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Prci228g0001 613 Gene3D Transferase(Phosphotransferase) domain 1 303 378 - -
Prci228g0001 613 Pfam Protein kinase domain 454 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci228g0001 613 Pfam Protein kinase domain 220 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci228g0001 613 SMART serkin_6 219 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci228g0001 613 FunFam Serine/threonine-protein kinase AGC1-7 450 575 - -
Prci228g0001 613 MobiDBLite consensus disorder prediction 1 132 - -
Prci228g0001 613 CDD STKc_phototropin_like 218 576 - -
Prci228g0001 613 Gene3D Transferase(Phosphotransferase) domain 1 451 575 - -
Prci228g0001 613 PANTHER FLIPPASE KINASE 1-RELATED 48 580 - -
Prci228g0001 613 MobiDBLite consensus disorder prediction 166 183 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci228g0001 114 613 AGC Kinase Gene Family AT5G47750 83.300 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci228g0001 Pkinase 9.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci228g0001 K08286 - gmx:100781600 977.622