Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci227g0002 ATGAAGATTCTTTCATTCTACGTTCTGCTCCTGTCTGTGCTTTCTCAATCCCTCCATTGCTGCAGCCAACAGGACCTCAAAGATATCGTTGACTGCTCTTTCAATTCCACAAACAAAGTAGCGTATGACTGCAATGGCCTCCAAAAGTCATGCATCTCCTTCGTAACTTTCAGATCCAATCCTCTTTATGATACCCCTCTTAACATTGCCAATCATCTTAGCTCCCAAGCAGCTTCCATAGCCTCCATCAACAACATCTCCAGCAATAACAACAACATTCCCATCGATCAACTTGTTATTGTTCCCATCGATTGTTCCTGTTTGGGTGGAATCTACCAGCATCCCACTTCTTATACCTTGAAGGCAGTTGACACCTACTTTACTGTGGCCAACAACACTTATCAAGGCCTTGCCATTTGCCAGATGTTGCTTCGACAAAATTATGTCATCGATCCCACTGCAGGCAAACAGGTTTCAGTTCCAATCTTATGTGCTTGTCCCACTGCTAACCAGATCTCAGATGGGGTCTCCTTCCTGCTACTTCACACAGTTGTATTTGGGGATTCAATTGAGTCAATCGCAAAGGCCTATGGTGCAGATCAACAGACTCTGCTAACCGCTAATAAGTTGCATCTAAATGATCTCATCTATCCCTTCACAACTTTTTTAGTTCCCATCAAACCTTCTTCCTGTAAACTTAATCCGCATTTATTCTACTGCACCTGCTCATTCTCTCAGAAATACCTTCCGAGTTCAAGTTTCAACACTCTCGATTGTGATCATCTTCAAAAAGATGCTCGTCGTTTCCCCATCAAATTGGTTGCTTCTTTAGGTGCTGGTATTGGTGCCGGACTTTTGTGCTTATTTCTTTTGAGTCACAAGTTACATCAATGCCTAAAACAAAAGAAAGAAAGAATCCGTCGGGAAAAGTTGTTCAAGCAAAATGGTGGCCTCTTGCTACAAGAAAAGATATCATGTTATGGAAACCGAGAGAAAGCAAAACTTTTTACAGTGGATGAGCTGGAACGAGCAACAGATAACTACAATCAAAGTAGGTTTCTTGGTCAAGGTGGATTTGGAACCGTTTATAAAGGAATGTTACAAGATGGTAGCATTGTCGCAGTCAAGAAGGCAAAAGAAATTGTGAGAAACCAGATTGAGACTTTGATTAACGAAGTGGTGATTCTGTCCCAAATAAACCATAGGAACATTGTCCAACTCCTAGGTTGGTGTCTAGAGACTGAAGCCCCATTACTGGTATATGAATTTATTCCCAATGGAACCCTTTCTCATCACATCCATAACCAGGAACTCGAAGCAAAGCTTTCATGGGACAACCGTCTCAGAATTGCTTGTGAGGTTGCAGGAGCACTGGCCTATATGCATTCTGCAGCTTCCATTCCCATCTTCCATAGAGACGTCAAAACTTCAAACATACTCCTGGATCATAAGTATAG 1457 0.4207 MKILSFYVLLLSVLSQSLHCCSQQDLKDIVDCSFNSTNKVAYDCNGLQKSCISFVTFRSNPLYDTPLNIANHLSSQAASIASINNISSNNNNIPIDQLVIVPIDCSCLGGIYQHPTSYTLKAVDTYFTVANNTYQGLAICQMLLRQNYVIDPTAGKQVSVPILCACPTANQISDGVSFLLLHTVVFGDSIESIAKAYGADQQTLLTANKLHLNDLIYPFTTFLVPIKPSSCKLNPHLFYCTCSFSQKYLPSSSFNTLDCDHLQKDARRFPIKLVASLGAGIGAGLLCLFLLSHKLHQCLKQKKERIRREKLFKQNGGLLLQEKISCYGNREKAKLFTVDELERATDNYNQSRFLGQGGFGTVYKGMLQDGSIVAVKKAKEIVRNQIETLINEVVILSQINHRNIVQLLGWCLETEAPLLVYEFIPNGTLSHHIHNQELEAKLSWDNRLRIACEVAGALAYMHSAASIPIFHRDVKTSNILLDHKYSAKVSDFGTSRSVPDDRTHLTTVVQGTFGYIDPEYFQSSQFTEKSDVYSFGVVLVELITGRKPITFSEENQGQNLVAEFMSLTKKDKVFEILDAKVVHEGRKDDLLGIANLAKRCLRLNGKKRPTMREVSTELEALRKTQNTLKITECSLEFPHDRKLAKHATPESDQESTEESMPLFFETDSTMSTSIQK 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci227g0002 676 FunFam Wall-associated receptor kinase 2 319 423 - -
Prci227g0002 676 Pfam Protein kinase domain 348 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci227g0002 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Prci227g0002 676 ProSiteProfiles LysM domain profile. 180 224 IPR018392 -
Prci227g0002 676 SUPERFAMILY LysM domain 180 225 IPR036779 -
Prci227g0002 676 MobiDBLite consensus disorder prediction 641 676 - -
Prci227g0002 676 SMART LysM_2 181 225 IPR018392 -
Prci227g0002 676 CDD LysM 182 218 IPR018392 -
Prci227g0002 676 Gene3D LysM domain 181 234 IPR036779 -
Prci227g0002 676 MobiDBLite consensus disorder prediction 654 676 - -
Prci227g0002 676 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Prci227g0002 676 CDD STKc_IRAK 354 621 - -
Prci227g0002 676 SMART serkin_6 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci227g0002 676 Pfam LysM domain 182 225 IPR018392 -
Prci227g0002 676 Gene3D Phosphorylase Kinase; domain 1 321 423 - -
Prci227g0002 676 FunFam Wall-associated receptor kinase 2 424 637 - -
Prci227g0002 676 SUPERFAMILY Protein kinase-like (PK-like) 332 618 IPR011009 -
Prci227g0002 676 Gene3D Transferase(Phosphotransferase) domain 1 424 638 - -
Prci227g0002 676 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 92 626 IPR045274 GO:0007166
Prci227g0002 676 Coils Coil 372 392 - -
Prci227g0002 676 ProSiteProfiles Protein kinase domain profile. 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci227g0002 278 625 Receptor kinase-like Gene Family AT1G16130 56.695 7.75e-134 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci227g0002 Pkinase 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci227g0002 - - vun:114186184 751.125