Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2264g0001 ATGTCTCGAGCTCACCCATCACCATCAGATCAGATCCAAAGGGAAGAAACTTCACCTTCTACCTTTTCGTATCTTCTCAGCACGGCCAGTGATACAAAAACCTTCTCAGTCCCAGTCTCACATGGTCAAGTAACCACCTCTTCTGGGGGGATCCAGAAGCAGGACCCATCCCGGCCTCCACGTCAAAATCAAGGCGACAGTGTGAGAAAGAGAAACTATAGAGGAGTAAGGCAGAGACCATGGGGGAAGTGGGCCGCCGAAATCCGAGACCCTAAAAAAGCAGCTAGAGTGTGGCTTGGCACCTTCGAGACGGCCGAGGATGCAGCCGCTGCTTATGATGCTGCAGCGTTAAGGTTCAAAGGAAGCAAAGCTAAGCTCAATTTCCCCGAACGCGTTTCTTTAGCTCCTTCTCCAACCATTTCATATTCGTCACAAAGCCTGCCGAGGCCTGAAGCGGCGCAGACGGTGTCTCAACCGCCTCTGGCTCCACCAACGGTCGACGAAGGGTTCCCGAATCTATTGCAGTACGCGCAGCTGCTTCGTGGTGGCCATCATGGTGACCTGCAAAGAGCTGCTTGGTCGGGACTTTATACGTATCAGAATGAGCCGGTATTTCTGGGCGATTCTTCTCTTCCGTTATTCTCGTCATCACCGGGAGTACTGTCTTCTTCGTCTGCTTCCATGTCTGAGTCTGATCAACAGCAGGTTCAAGATGCAAAGGGTGCGAAGATGGGAGATTATGGTACTTCTGGTTCTTGTTTTTTTGATGAAAGAAACACAAGTGGATAG 789 0.5095 MSRAHPSPSDQIQREETSPSTFSYLLSTASDTKTFSVPVSHGQVTTSSGGIQKQDPSRPPRQNQGDSVRKRNYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAAAAYDAAALRFKGSKAKLNFPERVSLAPSPTISYSSQSLPRPEAAQTVSQPPLAPPTVDEGFPNLLQYAQLLRGGHHGDLQRAAWSGLYTYQNEPVFLGDSSLPLFSSSPGVLSSSSASMSESDQQQVQDAKGAKMGDYGTSGSCFFDERNTSG 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2264g0001 262 MobiDBLite consensus disorder prediction 220 262 - -
Prci2264g0001 262 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Prci2264g0001 262 PANTHER DNA-BINDING DOMAIN 36 222 IPR044808 GO:0003700|GO:0009873
Prci2264g0001 262 MobiDBLite consensus disorder prediction 136 161 - -
Prci2264g0001 262 MobiDBLite consensus disorder prediction 220 238 - -
Prci2264g0001 262 Pfam AP2 domain 72 121 IPR001471 GO:0003700|GO:0006355
Prci2264g0001 262 Gene3D AP2/ERF domain 71 131 IPR036955 GO:0003700|GO:0006355
Prci2264g0001 262 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Prci2264g0001 262 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Prci2264g0001 262 MobiDBLite consensus disorder prediction 1 21 - -
Prci2264g0001 262 SUPERFAMILY DNA-binding domain 72 130 IPR016177 GO:0003677
Prci2264g0001 262 CDD AP2 72 130 IPR001471 GO:0003700|GO:0006355
Prci2264g0001 262 MobiDBLite consensus disorder prediction 35 76 - -
Prci2264g0001 262 FunFam Ethylene-responsive transcription factor 2 71 130 - -
Prci2264g0001 262 MobiDBLite consensus disorder prediction 136 163 - -
Prci2264g0001 262 ProSiteProfiles AP2/ERF domain profile. 72 129 IPR001471 GO:0003700|GO:0006355
Prci2264g0001 262 MobiDBLite consensus disorder prediction 35 63 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2264g0001 54 151 AP2-EREBP Transcription Factor Family AT5G61890 72.277 1.01e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci2264g0001 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2264g0001 - - gsj:114398791 185.652