LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2225g0001	ATGGAGCTTTCAGAAACCAGACCAAGTCAGCCCCACCACCGCCAACAACATCGTCAGAACCATCAGCAGTATTTGCAGCAGCAGCAACAAAATCAGTTACAGTTGCCTCCGTTGTCGCAGGTTGCTGTGGTCCCTTTTAATGGAGGAAGAGGAGGTCCCTCGTCTTTCATCAATGTGGGCTCCACCATCTCCATCCAAGCTGGCCTCTCTGCTGCTACGGCTGCTTCTGCTTCTTTGTCACCTTCTCCTACTTCTTCTTCTTCGTCGTCCTCGTCATCTTCAGCTCCGGTTAATTCTCTCATCGATGCCTCTCCTGCCATCGACATCCCTAGATCTGACCCTGAATCATCTGCTGATCCATCCAGGCTTCTGCTCGATTCGATCAGGAGACAAGAAGTTCGGCGACAGTTGTTAATCTCTACAGGGACGGCGGCGGCAGTGGCGGCGAGGAATGTAGGTGCGAACAGGCCGAAAACGAAGGACAGACACACCAAGGTTGATGGTCGTGGCCGGAGAATTAGAATTCCGGCAGGCTGTGCGTCTAGGGTTTTTCAGTTAACCAAGGAGCTGGGTCTGAAGTCCGACGGAGAGACGATCGAGTGGCTTCTGCAGCACGCGGAGCCGGCAATCATGGCCACCACTGGCACCGGCACGTTGTCCTCAAACTTCTCAACTCTCAACCCGTCGCATCGGAGTGGTGGGTCCACTTTCTCGGCTCCGCCGACGAGGTTTGCTCCGAATACATTTCATGGAGTTGTAGCACCCTCTGCTAATTATCAGCCTTTCGAAGAACTGTATCCGCGTTCTACTTTGTTAGGGTTAATGCAGCAATATCAACCTCAGCAACAAGACGACCAAATTCATCTATTGACCGCCGGTCAAATTCCAGAAGAGCTACCAGGTGCCGCCGGCGGAGCAGTGAACGTCGGAGAATCCACTGAAGATTATACGAGAAAACGTTTCCGAGAAGACTCTATCCAAGAACAAATACAACAACGCGTGGATGTTGACTCGCAATTTCAGAAGCAACCACAACAGCTGCTGCAAAAAGGACCTTCGACTTTGAACGTCCTTCGTCCACCTACCAATTTCCTCCGCACCCCAATGTGGGCGGTGGCGCCATCTGATCCCGGCGGCGGCTCTGTCGGTAGCACATTTTGGATGCAAAGCAGCTGGAGTGGAGGTACTGGTGTCGCCGCCACAGACAGCGTCAGTTATGGATCATTTCCGACGGCACAGACTGGTGGTTGTGGAAGCATGAATCAGTTTCAAGGCTCGCCGCAATTCAGTTATCCCCATGGAAATGTCGAATTTCGAGGTGGTGGGAGTGGCGGAGGTCGTCTGCAACTGGCACCGACGTCGTCGTTTTTGCTGCCTCCTCAGGCTCAGATGATGGATCAGTCCGACGTGGCTGCATTGAATGCTGCGTTTCCTAGTGTTTGTTTTGAGAATGTGAATTCACCAGACGACCTTCATCATCTTTATCCTCAAGCTGATGATAATGGAGAATAA	1512	0.5218	MELSETRPSQPHHRQQHRQNHQQYLQQQQQNQLQLPPLSQVAVVPFNGGRGGPSSFINVGSTISIQAGLSAATAASASLSPSPTSSSSSSSSSSAPVNSLIDASPAIDIPRSDPESSADPSRLLLDSIRRQEVRRQLLISTGTAAAVAARNVGANRPKTKDRHTKVDGRGRRIRIPAGCASRVFQLTKELGLKSDGETIEWLLQHAEPAIMATTGTGTLSSNFSTLNPSHRSGGSTFSAPPTRFAPNTFHGVVAPSANYQPFEELYPRSTLLGLMQQYQPQQQDDQIHLLTAGQIPEELPGAAGGAVNVGESTEDYTRKRFREDSIQEQIQQRVDVDSQFQKQPQQLLQKGPSTLNVLRPPTNFLRTPMWAVAPSDPGGGSVGSTFWMQSSWSGGTGVAATDSVSYGSFPTAQTGGCGSMNQFQGSPQFSYPHGNVEFRGGGSGGGRLQLAPTSSFLLPPQAQMMDQSDVAALNAAFPSVCFENVNSPDDLHHLYPQADDNGE	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2225g0001	503	PANTHER	TRANSCRIPTION FACTOR TCP4-RELATED	84	441	IPR005333	GO:0003700
	Prci2225g0001	503	Pfam	TCP family transcription factor	158	279	IPR017887	-
	Prci2225g0001	503	ProSiteProfiles	TCP domain profile.	159	213	IPR017887	-
	Prci2225g0001	503	MobiDBLite	consensus disorder prediction	1	33	-	-
	Prci2225g0001	503	MobiDBLite	consensus disorder prediction	77	99	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2225g0001	154	458	TCP Transcription Factor Family	AT1G72010	37.188	4.66e-39	144

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TCP	Prci2225g0001		TCP	8.2e-30	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2225g0001	-		-	pcin:129301586	876.7