Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci221g0002 ATGACAATGTTACCTGAACTGGGAATAGTGGAGGATCCTGCCTTTCTTCATCAATGGCAATTGAACTCTCTGGAAGATCCAAGCTTATTTGAAGAGACCTTACAACAACATTCATTCTCTAACCTAAACCCAACAATGTTCAATCCCAAAACGTCCATGGAAACTACACTTTGTAGCATTGAAAGGCCCCAGAAACAGTTCAAACCCAACAATAATTGGAGCCCCAACACAAGTGATCAGAACCAGACGTTAGACACAGACTATGATTCTTGTTCCAATCTTCTTTCCTTTGTCAATTCAAGTTACATAAGCCAATTCGGGACATTGATGAAGCCTAAGGACCAGCAGACACCTTGTCCTGAAATCAACAGTACAATCCCCTCAGACATGTTGGTCTCTTATGGATCCTTGGGAAATCAGAACCTTGTCTTCAATGCAGGACAAGATCCCAGAAAAATTGGAACAAGTCCTAAACTTTCTCAACCTCAAGACCACATAATCGCTGAGCGAAAGCGACGAGAAAAGCTCAGCCAACGGTTCATAGCTCTATCTGCTCTTGTACCTGGCCTCAAAAAGACAGACAAGGCTTCTGTTCTTGGAGATGCTATAAAGTATTTGAAGCAATTGCAAGAGAAGGTTAGGCTCCTTGAAGAGGAACAGAGTAGAAAGAGCACTGTGGAATCTGTGGTGGTTGTGAAGAAAACTCAAATATTAGCCAATGAAAGCCATTGTTCTTCAGACTCTGGTGATCACAGTGAGGAGCCATTACCAGAAATTGAAGCCAGAATTTGTGAAAGAAACGTCCTCATAAGAGTTCACTGTGAGAAAAGAACACAAGTGATAGAAAAAACAGTCAGTGAGATAGAGAAACTCCATCTGATAGTCACAAGTACCAGTGTCATGACATTTGGCAGTTCTGCTCTTGATATAACCATAATCGCTCAGATGGATAAGGACTTTTGCATGACAGTGAAGGAGCTTCTGAGAAGCCTACGCTCAGCTTTTGAATCTTTCATGTGA 1020 0.4176 MTMLPELGIVEDPAFLHQWQLNSLEDPSLFEETLQQHSFSNLNPTMFNPKTSMETTLCSIERPQKQFKPNNNWSPNTSDQNQTLDTDYDSCSNLLSFVNSSYISQFGTLMKPKDQQTPCPEINSTIPSDMLVSYGSLGNQNLVFNAGQDPRKIGTSPKLSQPQDHIIAERKRREKLSQRFIALSALVPGLKKTDKASVLGDAIKYLKQLQEKVRLLEEEQSRKSTVESVVVVKKTQILANESHCSSDSGDHSEEPLPEIEARICERNVLIRVHCEKRTQVIEKTVSEIEKLHLIVTSTSVMTFGSSALDITIIAQMDKDFCMTVKELLRSLRSAFESFM 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci221g0002 339 Coils Coil 199 226 - -
Prci221g0002 339 PANTHER BHLH TRANSCRIPTION FACTOR 28 335 - -
Prci221g0002 339 Pfam Helix-loop-helix DNA-binding domain 163 210 IPR011598 GO:0046983
Prci221g0002 339 CDD bHLH_AtNAI1_like 163 234 - -
Prci221g0002 339 Gene3D - 160 233 IPR036638 GO:0046983
Prci221g0002 339 MobiDBLite consensus disorder prediction 65 84 - -
Prci221g0002 339 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 222 IPR036638 GO:0046983
Prci221g0002 339 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 209 IPR011598 GO:0046983
Prci221g0002 339 SMART finulus 166 215 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci221g0002 10 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.348 2.44e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci221g0002 HLH 2.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci221g0002 - - gmx:100798018 411.379