Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2218g0001 ATGAATCACTACTCAAATGAGCCAGATCCAGACAGTGGCAGACTCTTCTTTGGAGTCCCAATCTTCTCCTATAATGAGCTTCAAGATGCAACCAAAAACTTTGACCCCTCCAACAAACTTGGAGATGGAGGCTTTGGCTCTGTTTACTATGGAAAACTTCAAGATGGGCGTGAAGTTGCAGTGAAACACCTATTTAACCACAACTACAAGCGAGTAGAACAATTTATGACTGAAGTTGAAGTTCTCACTCGCTTGCGTCACAAGAACCTTGTCTCCCTCTATGGCTGCACTTCTCGTCAAAGTCGTGAGCTCCTTCTTGTCTATGAATACATCCCAAATGGCACTCTTGCTAGTCACCTTCGTGGACACTTTGCAAAACTTGCTTTGTTGACATGGACTAAGCGTATCAAAATTGCCATAGAAACTGCAAGTGCCTTGGCTTACCTTCATGCTTCCGGAATCATCAATCGTGATGTCAAAACCAACAACATTCTTCTCGACAACAATTTCTGTGTTAAGGTTGCGGATTTTGGACTTTCTAGATTATTCCCTGATGATGTGTCACATGTTTCTATAGCTCCTCAAGGAACACCAGGTTATCTTGACCCAGAGTATCTTTGCTTCAGGCTAACTAATAAAAGTGATGTGTATAGCTTTGGAGTTGTGCTCATGGAGTTAATATCTTCTTTGCCAGTAGTTGACATGGGAAGGAATAAAGATGAGATTACATTAGGGAGTCTTGCAGTGAGGAAGATTCAAAAAAATGAATTGGAGGAGCTAATGGATCCATGTTTAGGAATTGAGAAAGATAGTGAACTGAAGAGGAAGGTGGTTGCGGTGGGCGAACTGGCATTTCAGTATTTGCAGATAAATAATGAGATGAGACCTTCCATTAATGAGGTTTTAGAGATTTTGAGGAAGATTGGGAGGGAATAA 936 0.4135 MNHYSNEPDPDSGRLFFGVPIFSYNELQDATKNFDPSNKLGDGGFGSVYYGKLQDGREVAVKHLFNHNYKRVEQFMTEVEVLTRLRHKNLVSLYGCTSRQSRELLLVYEYIPNGTLASHLRGHFAKLALLTWTKRIKIAIETASALAYLHASGIINRDVKTNNILLDNNFCVKVADFGLSRLFPDDVSHVSIAPQGTPGYLDPEYHXCFRLTNKSDVYSFGVVLMELISSLPVVDMGRNKDEITLGSLAVRKIQKNELEELMDPCLGIEKDSELKRKVVAVGELAFQYLQINNEMRPSINEVLEILRKIGRE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2218g0001 312 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 310 IPR044652 GO:0004672
Prci2218g0001 312 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 17 110 - -
Prci2218g0001 312 Gene3D Phosphorylase Kinase; domain 1 10 110 - -
Prci2218g0001 312 SUPERFAMILY Protein kinase-like (PK-like) 13 306 IPR011009 -
Prci2218g0001 312 Pfam Protein tyrosine and serine/threonine kinase 38 267 IPR001245 GO:0004672|GO:0006468
Prci2218g0001 312 SMART serkin_6 34 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2218g0001 312 FunFam Wall-associated receptor kinase-like 20 111 312 - -
Prci2218g0001 312 ProSiteProfiles Protein kinase domain profile. 34 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2218g0001 312 PIRSF ILK 22 312 - -
Prci2218g0001 312 Gene3D Transferase(Phosphotransferase) domain 1 111 310 - -
Prci2218g0001 312 ProSitePatterns Protein kinases ATP-binding region signature. 40 62 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2218g0001 5 312 Receptor kinase-like Gene Family AT1G25390 64.078 1.45e-138 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci2218g0001 PK_Tyr_Ser-Thr 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2218g0001 - - gmx:100808963 456.447