Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci220g0001 ATCTGGGATACGCTAAATGGTCAAATCCAGACCGAGTTTGCAGACATCACATCAAGTGATGCAACAAGTATATATGCAGGATCGATGAAGGGTCATCTTTCAATAGATTATACATGCATGAAATGGTTGTCATTAGAAAAAAAAGGTTGGTCAAGAAAAAGGAAACACACATCCTCATTGCTAGTACTTGGAACAGGTAGTGGTGACGTGTTGGCACTTGATGTGTCTGCCGGGCAATTAAATTGGAGAATTGACGACTGCCATCCTGGAGGCGTGAAAGCTGTTTCATCTTCTGCAAATGGATCATGTGTTTATACTGCAGGTGCAGATGGAATGATTTGCAAGATTGATTGTAAGACAGGAAACCTGTTGGAGAAATTCAAAGCTTCTTCAAAGGCAATATCCTGTATGTCTGTTTCTTCAGATGGGAGGACAATAGCAACTGCAGCAGCACAACTAAAGATATTTAATTGTTCTGATCACAAAAAGATACAGAAGTTCTTTGGCCATCCTGGATCTGTTCGGTGTCTTGTCTTCACTGAAGATGGGAAGTATATTCTATCCTCTGCTGTTGGTGAAAGATATGTTGCTATCTGGAGGATTGATGGGGCAAAAAAGAAGTCAGTTAGTTGTGTTCTTGCAATGGAGCATCCTGCTGTTTTTCTTGATAGCAGGTGCACTCCTAGCAGGGAGCGTGACAATGTTGGTGCATGTGTTTTGGCTATCTCAGAAGTTGGCGACTGTTATGTTTGGTTTGGAAATAGTATTGAGGAACTACATAATGTGAAGCCCACTAAAATATCATTATCTTCGGAAGACACATCTTCCAGAAAATACATGGGTGCATTGCCAGCAATATATGCTGCAAAGTTAGAAAGCATTAACAATCCTGCCTCTGGTCAGGTTTTACTTGTTCATGGGTTGCTTGTAAGACCATCATTTCAAAAACTTTCAGTGCAATCTGGCTCAGACATCAAATTGAATTTTTCTGATGATGGTATTCTTCTTCGGCTGAACAAGTCCCTTGTAAAGTCTAAGAAGGCAAAAGATGTGAAAAAAGTTACTGCACTAGACCGTGCTAATGCAGAGGATGCCTTGCTCCCGATTCCTAAGCTTTATGATTCTCATGTGCAAGAGAAAGAATTTCAAGATTCTTCAGGCAAGGAGGTTATGGATGATTTGGTTAGAAGCAGTGAATCTGTTTCTATGGAGATTGAAGATGAGATGACACAGGGCGAGACTGATGTGATCTCCATGGAGGATCAGATGAGATCTCTGGGGATACTTGGTGATGAAAATGATCTTGAATCAAATATCAAATCTACTTCTTCATTGTTGAAGGGTGTTGATCTTGAAGCTACTCTTCCAATGAGAAAGATAAGAGAAACTGTCTTGACTATGGAGCCATCTGAAGCATATAAACTCCTGGAAGTTTTGCTGACTGTTTGGCAATCAAGGTCATCTACTGGCAAGCATGCTCTTCCGTGGGTATATAGCATATTGGTGATTCATGGTCACTACTTAATTTCTCAGGAAAATGTGACACATATGCTTGATTCCTTGACCAAGATGGCTAGCTCTAGAGGATCTGCAGTTCAGACTTTGTTACGATTGTCAGGTCGTCTGCAATTGGTGACAACACAGATTAATAAGGCTTCTAAAAGCAAAACTCATTCATTGCGAGATCCACAAATGGAAGAAAGCGATGAGGACAAAGATGATTATTTTGAAGAGGAAGGAGATGATGCATCTGAAATAAGTAGTGATGACGATGACAGCTAA 1782 0.4046 IWDTLNGQIQTEFADITSSDATSIYAGSMKGHLSIDYTCMKWLSLEKKGWSRKRKHTSSLLVLGTGSGDVLALDVSAGQLNWRIDDCHPGGVKAVSSSANGSCVYTAGADGMICKIDCKTGNLLEKFKASSKAISCMSVSSDGRTIATAAAQLKIFNCSDHKKIQKFFGHPGSVRCLVFTEDGKYILSSAVGERYVAIWRIDGAKKKSVSCVLAMEHPAVFLDSRCTPSRERDNVGACVLAISEVGDCYVWFGNSIEELHNVKPTKISLSSEDTSSRKYMGALPAIYAAKLESINNPASGQVLLVHGLLVRPSFQKLSVQSGSDIKLNFSDDGILLRLNKSLVKSKKAKDVKKVTALDRANAEDALLPIPKLYDSHVQEKEFQDSSGKEVMDDLVRSSESVSMEIEDEMTQGETDVISMEDQMRSLGILGDENDLESNIKSTSSLLKGVDLEATLPMRKIRETVLTMEPSEAYKLLEVLLTVWQSRSSTGKHALPWVYSILVIHGHYLISQENVTHMLDSLTKMASSRGSAVQTLLRLSGRLQLVTTQINKASKSKTHSLRDPQMEESDEDKDDYFEEEGDDASEISSDDDDS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci220g0001 593 PANTHER OS03G0300300 PROTEIN 1 592 - -
Prci220g0001 593 MobiDBLite consensus disorder prediction 552 593 - -
Prci220g0001 593 Pfam Dip2/Utp12 Family 456 546 IPR007148 -
Prci220g0001 593 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 1 205 IPR011047 -
Prci220g0001 593 Pfam WD domain, G-beta repeat 164 199 IPR001680 GO:0005515
Prci220g0001 593 SMART WD40_4 160 200 IPR001680 GO:0005515
Prci220g0001 593 SMART WD40_4 77 117 IPR001680 GO:0005515
Prci220g0001 593 SMART WD40_4 120 157 IPR001680 GO:0005515
Prci220g0001 593 Gene3D - 1 288 IPR015943 GO:0005515
Prci220g0001 593 MobiDBLite consensus disorder prediction 567 593 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci220g0001 88 199 U-box Gene Family AT2G33340 27.586 8.85e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci220g0001 K14546 - gmx:100784148 756.518