LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2195g0001	ATGCAGCCGCAACTGCAACAAAAGCCTCTCTTCTTCTTTGTCTTCTTAAGCTTCATAATAATCTGGTCATGGGGGACTCTTGACGGCGTCGTTTCAGACCCTCAGACGAATCTAGTGCGACTGTGGTGCGATCAAGACGGCGACAATGATGGGTCCATCTTGAAGGAGATCCTCAACGAAACGTTTCGAGACCTGAGAGCTCAGATCGAAGACCAAAGCAAACTCTTCGGCACAGCTCAAGCAGTGAAGGCTAACATCGCCGTTTATGGCCTTTTTCAATGTAGAAACTACCTCTCCATAGCCGACTGTCTTGCTTGCTTTAACGTCGCCGCCGTGAACATCCGCAACTGCTCCGCCAGGGCTTACGGTGCTCGTCTCGTCTACGACGGCTGCTTCCTCAGGTACGAGAGCACTCAAGAATTCGATCAGGCCAGTGAAAGTTGGAACAACATAAGATGTGGGAATCAGACACTAAAAGATTCCCCTGCGCTTGCTTCAACTGTGCAACAAGTTCTGACAAATCTAGGCACAGCAACCCCCAGAATGCCAGGTTTCTATGCGGCCACTAAGACGGCCGTGCCTAATAGTAATGGCTTCAGTATTTATGCCATTGCTCAATGTGTTGAGACCCTCTCACAAAGTGGCTGCCAGAATTGCATCGACACTGCGTCAGGAAAATTTCAGACTTGTCTTACAACCTCAAATGCTGAGAGTTATGATACGGGCTGTTTCATGAGATACTCCACCAATGCTTTCTTCTCTGATAATCAAACCACTGATATCAACGGCTTCTTGAAGAAACAAGGTTCAAGCAATAAGGCATTCATCATTGGTATTGTTATTGGAGGTTTAATGCTTTTTTTGATCCTCCTTATTGCATTATTTGCCTGGATTAGGCCACGAAAAAGCCCAAAGAGGGTTCCCAAAGGAGACATTACTGGAATAAGCCAGTTGAAGGCCCCAGTTAATTACAATTATAAGGATTTGAAGTCTGCAACAAAAAATTTCAGCCTTGAAAATAAACTTGGAGAAGGAGGATTTGGTGCAGTATATAAGGGCACTCTGAAGAATGGGAAAGTAGTTGCAGTCAAGAAATTAACTTTACGGCAATCCAAGAGGGTGGAGGAAGAATTTGAGAGTGAAGTGAAGCTTGTAAGTAATGTTCATCATCGGAATCTTGTTCGACTTCTTGGATGTTGTAGTAGAGGCAATAAGAGAATTCTGGTCTATGAATACATGGAAAAGACCAGTCTCGACAGATTCTTATTTGATGATGATTTACAACCTAAGATTGCTGATTTCGGCTTAGCGAGGCTCTTACCCGAGGACAAAACTCATCTCAACACAAGATTTGCTGGAACATTAGGATACACAGCACCGGAGTATGCGATTCATGGACAATTATCAGAGAAGGTTGATGTGTATAGCTATGGTGTTGTAATCCTAGAAATCATTAGTGGTCGAAGAAACAATGAATTAAATGTCAACGGTGCTGCTGAAGGCGAATTCCTCCTTCAACAAGCTTGGAAGTTATATAAGAGAGGCATACACATAGAGTTGGTGGACGATACCATAGACCCTAATGATTATGATGTAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGGATCTGTAGAAATAAGGCCGAAAATGTCTGAAGTAGTTGCACTGCTCCAACAAAAGGGTTTATCAGAGGATATGAGACCCACTATGCCTATTTTGATTGAAATTAATTAG	1752	0.4315	MQPQLQQKPLFFFVFLSFIIIWSWGTLDGVVSDPQTNLVRLWCDQDGDNDGSILKEILNETFRDLRAQIEDQSKLFGTAQAVKANIAVYGLFQCRNYLSIADCLACFNVAAVNIRNCSARAYGARLVYDGCFLRYESTQEFDQASESWNNIRCGNQTLKDSPALASTVQQVLTNLGTATPRMPGFYAATKTAVPNSNGFSIYAIAQCVETLSQSGCQNCIDTASGKFQTCLTTSNAESYDTGCFMRYSTNAFFSDNQTTDINGFLKKQGSSNKAFIIGIVIGGLMLFLILLIALFAWIRPRKSPKRVPKGDITGISQLKAPVNYNYKDLKSATKNFSLENKLGEGGFGAVYKGTLKNGKVVAVKKLTLRQSKRVEEEFESEVKLVSNVHHRNLVRLLGCCSRGNKRILVYEYMEKTSLDRFLFDDDLQPKIADFGLARLLPEDKTHLNTRFAGTLGYTAPEYAIHGQLSEKVDVYSYGVVILEIISGRRNNELNVNGAAEGEFLLQQAWKLYKRGIHIELVDDTIDPNDYDVEEVKKIIEIGLLCTQGSVEIRPKMSEVVALLQQKGLSEDMRPTMPILIEIN	583

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2195g0001	583	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	422	578	-	-
	Prci2195g0001	583	SUPERFAMILY	Protein kinase-like (PK-like)	321	566	IPR011009	-
	Prci2195g0001	583	Pfam	Salt stress response/antifungal	159	249	IPR002902	-
	Prci2195g0001	583	Pfam	Salt stress response/antifungal	52	137	IPR002902	-
	Prci2195g0001	583	FunFam	Cysteine-rich receptor-like protein kinase 2	304	412	-	-
	Prci2195g0001	583	ProSiteProfiles	Gnk2-homologous domain profile.	146	252	IPR002902	-
	Prci2195g0001	583	Gene3D	Transferase(Phosphotransferase) domain 1	415	574	-	-
	Prci2195g0001	583	ProSiteProfiles	Gnk2-homologous domain profile.	36	140	IPR002902	-
	Prci2195g0001	583	Gene3D	-	146	252	IPR038408	-
	Prci2195g0001	583	Gene3D	-	36	139	IPR038408	-
	Prci2195g0001	583	ProSiteProfiles	Protein kinase domain profile.	336	583	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci2195g0001	583	Pfam	Protein tyrosine and serine/threonine kinase	337	424	IPR001245	GO:0004672\|GO:0006468
	Prci2195g0001	583	Coils	Coil	55	75	-	-
	Prci2195g0001	583	ProSitePatterns	Protein kinases ATP-binding region signature.	342	365	IPR017441	GO:0005524
	Prci2195g0001	583	Gene3D	Phosphorylase Kinase; domain 1	304	412	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2195g0001	5	566	Receptor kinase-like Gene Family	AT1G70520	31.079	8.22e-92	294

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci2195g0001		PK_Tyr_Ser-Thr	1.9e-18	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2195g0001	-		-	pcin:129300003	657.907