Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2194g0001 ATGGCAATTGCAGCAACCTCTTCATCCCCCACCATGAGCCTCATCAGCCACAGCCACAGCCACGACGACACCACCACAACCGCCGCCACCTCCTCTGCCACTAATGACTGCGGCGGCGCCCTCAGGCATCCCGACGACGATGAAGACGAAGATGAAAACGGCATCAACAACGACGACCACCACCAGCAAGATATGGTCATGCCGGGCTTCCGCTTCCACCCAACGGAAGAAGAACTGGTCGAGTTCTACCTCCGCCGGAAAGTCGAAGGCAAGCGTTTCAACGTCGAGCTCATCACCTTCCTCGATCTCTATCGTTACGATCCATGGGAGCTTCCTGCTATGGCGGCGATCGGAGAGAAGGAGTGGTACTTCTACGTCCCGAGAGACAGGAAGTATCGGAACGGAGATAGGCCGAACAGGGTGACGACGTCGGGGTACTGGAAGGCGACGGGAGCTGATAGAATGATTCGAGCGGCGGAGAGTTCAAGGTCGATCGGGTTGAAGAAAACCCTAGTTTTCTACTCTGGAAAAGCTCCCAAAGGGATTCGAACCAGTTGGATTATGAATGAGTATCGCTTGCCTCACCATGAAACCCAACGCTTACAAAAGGCTGAGATATCTCTGTGTCGAGTGTACAAGAGACCAGGTGTAGAAGACCACCCTTCTCTTCCTCGCAGTCTTCCAACCAGATTGTCCACTTCATCACCATCAAAACCTTCTTCAGAGAAGAATTATCATAAGCACAACAACGTTGTTCCAGAGATGTTTCATCATCATCATCATGAAAACATGGGATTATTTCTGGAACAACTCATCATCATCATCATCATCAAGATCAGCAAATTACCAACGAAACTGATCAGGGAAGCAGTAGCAGTACTGCTGCTACAACTACCACCACCACCACTAACAACAACAACAACAGTTCAGTATTAA 936 0.5021 MAIAATSSSPTMSLISHSHSHDDTTTTAATSSATNDCGGALRHPDDDEDEDENGINNDDHHQQDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRAAESSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETQRLQKAEISLCRVYKRPGVEDHPSLPRSLPTRLSTSSPSKPSSEKNYHKHNNVVPEMFHHHHHENMGLFLEQLIIIIIIKISKLPTKLIREAVAVLLLQLPPPPLTTTTTVQY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2194g0001 311 MobiDBLite consensus disorder prediction 1 37 - -
Prci2194g0001 311 Pfam No apical meristem (NAM) protein 68 193 IPR003441 GO:0003677|GO:0006355
Prci2194g0001 311 MobiDBLite consensus disorder prediction 217 246 - -
Prci2194g0001 311 MobiDBLite consensus disorder prediction 1 65 - -
Prci2194g0001 311 MobiDBLite consensus disorder prediction 226 240 - -
Prci2194g0001 311 SUPERFAMILY NAC domain 65 214 IPR036093 GO:0003677|GO:0006355
Prci2194g0001 311 Gene3D NAC domain 75 217 IPR036093 GO:0003677|GO:0006355
Prci2194g0001 311 ProSiteProfiles NAC domain profile. 66 214 IPR003441 GO:0003677|GO:0006355
Prci2194g0001 311 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 64 242 - -
Prci2194g0001 311 FunFam NAC domain-containing protein 35 75 217 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2194g0001 49 230 NAC Transcription Factor Family AT2G02450 81.818 4.01e-116 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci2194g0001 NAM 2.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2194g0001 - - pcin:129301557 525.398