Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2187g0003 ATGTGTTATTTTTCAGGTTTTTTCGGAGAAGTATTCCGAGGCATATGGAATGGGACAGATGTTGCCATAAAGGTTTTTCTGGAGCAAGATTTGACTACTGAAAACATGGAAGATTTCTGCAATGAGATAACGATTCTCAGCCGGCTTCGACATCCTAACGTTATTTTATTTCTTGGTGCATGCACAAAGCCTCCGCGTTTGTCAATGGTTACTGAGTATATGGAGATGGGATCTTTGTATTACTTGATCCATTCGAGCGGTCAAAAGAAGAAGCTTAGTTGGCGGAGAAGACTGAAGATGTTGCGGGATATATGCAGGGGGTTGATGTGCATACATCGTATGAAGATAGTTCACCGTGACCTGAAAAGTGCAAATTGTCTTGTGAATAAGCATTGGACTGTGAAGATCTGTGATTTTGGGCTTTCAAGAATAATGACAGATTCTCCCATGAAAGATTCTTCGTCAGCGGGGACTCCTGAATGGATGGCTCCTGAACTTATTCGAAATGAACCATTCACAGAAAAATGTGATATCTTTAGCCTGGGGGTCATAATGTGGGAGCTTTGCACTTTAGATAGGCCATGGGAAGGTGTACCACCAGAGAGGGTGATTTATACCGTTGCTAATGAGGGATCTAGGCTAGAGATTCCTGAGGGGCCGCTGGGCAGGCTGATTTCAGATTGCTGGACAGAACCTCATAAGCGGCCAAGTTGTGAAGACATCCTTTCTCGTCTGCTTGACTGCGAATACTCTCTGTGCTAA 762 0.4383 MCYFSGFFGEVFRGIWNGTDVAIKVFLEQDLTTENMEDFCNEITILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHSSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTDSPMKDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLDRPWEGVPPERVIYTVANEGSRLEIPEGPLGRLISDCWTEPHKRPSCEDILSRLLDCEYSLC 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2187g0003 253 SUPERFAMILY Protein kinase-like (PK-like) 5 245 IPR011009 -
Prci2187g0003 253 Gene3D Phosphorylase Kinase; domain 1 4 75 - -
Prci2187g0003 253 Gene3D Transferase(Phosphotransferase) domain 1 76 251 - -
Prci2187g0003 253 PIRSF ILK 4 251 - -
Prci2187g0003 253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Prci2187g0003 253 Pfam Protein tyrosine and serine/threonine kinase 5 245 IPR001245 GO:0004672|GO:0006468
Prci2187g0003 253 PRINTS Tyrosine kinase catalytic domain signature 71 84 IPR001245 GO:0004672|GO:0006468
Prci2187g0003 253 PRINTS Tyrosine kinase catalytic domain signature 176 198 IPR001245 GO:0004672|GO:0006468
Prci2187g0003 253 PRINTS Tyrosine kinase catalytic domain signature 157 167 IPR001245 GO:0004672|GO:0006468
Prci2187g0003 253 PRINTS Tyrosine kinase catalytic domain signature 110 128 IPR001245 GO:0004672|GO:0006468
Prci2187g0003 253 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2187g0003 253 FunFam Serine/threonine-protein kinase isoform 1 3 75 - -
Prci2187g0003 253 CDD STKc_MAP3K-like 5 245 - -
Prci2187g0003 253 SMART serkin_6 5 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2187g0003 253 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 5 245 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2187g0003 6 253 MAP Kinase Kinase Kinase AT3G58640 86.694 1.11e-164 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Prci2187g0003 PK_Tyr_Ser-Thr 9.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2187g0003 - - pcin:129301544 536.569