Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2177g0001 ATGACCATGGGTAATCCTGTTTTTGTGGAGTGGGAAGAACAAATTATATGCCAGGAGCGTGGGAATCGTGTAACTCACTTCTACTTAAGGGATGCATCAGGGAATTCAGTGCTTGCTGTAGTGGGCACCGAGAGGAGTATAAGGCATATGATGTATGTTGTGTCAGACGAATTTTTGCAGGCTTATGGATCCAGAGATATCATTTCTGGGTGTAAATGGCGGGCTAGAAGAGAGGTGGTAGACTGGCTGACATGTTTGGTATCGAGGAATAGACATCAACATATGGATGATTTGGATGCACTGATGAATGATTCGGCACAAGCTGTAAATTCTCTTGAAGCATTAACAACTGGAACCAGTGCTAATAAAACGTATTCATCTTACAAGATGGTTTCTAGGAAGTTGAAAATTCAAAGTTCCGACATTGAATGGTCAGGCACTTCTTGGTTTTGTGCTAAGCAGCTTAAGCACTACTCAGGATTTTGTAGGAACGGGACAACTATTTATGTTCATTCATTTGTATATATCATGGCTGAAGAAGAAATTCAGTATCTTGGTTACATAGAAGACATGTATGAGGATAAGAAGGGGCAGAAAAAGGTCAAAGTAAGGTGGTTTCACCATGGTCAGGAAGTTAAGCAGGTTATGCCACAGCTGAATCTGCAACCTGGAGAAGTTTTTATCACATCTCATGTTCAAGTGGTTAGTGCTGATTGCGTCAATGGTCCTGCAATTGTTTTGAGTCCTAAGCATTATGAGAAATGCTTGCTTGCTGCATCACAAGCCTCTTCAGCTGATGTCCATGTATGCTCAAGGCAGTTTAAAAACAATAAGCTTAAGCCTTTCTCTCTCTCTAAGTTGCGTGGGTATTGTAACCAGTCCGTGCTTTCTTGTTTGAGTAGCCCTATCCTTTCTAAGAGAAAGGTGAAGCATCCAAAATTGCACAGAGAAGATGAAGAAGATCCTTCAAGGCCTAGCAGTAAGAGGAATAGAAGTTCTAAAGGGTACCAAATACTTGGAAAGGTTTCTTCTACTCTTCAAAACGCTGCCCGGAAGAATCAGATAACAGAATGTGAGCCAGTGTTCCCAATGCTAAAATTAAAACTGTCAAGAAAAACAATGGGTATTAAAGTTATCGGTCCTAAGCCCAAGAGTCATCCGTCTTTCAAGGATGATGATAGGATAGAGATTTTGTGTCAAGATAGTGGCATAAGAGGGTGCTGGTTTAGGTGTAAAATGTTACATACATCCCAAAAGAAGCTGAAGGTCCAGTATGAGGATATACTGGATGTAGATGGAAAGGGAAAGCTGGAGGAATGGATCCCTGCATATAGAGTGGCATCTCCTGATAAATTGGGTATTCGATGTACGGGCCGCTTTACAGTACGGCCACATCCTCCTGAAGATACTGCAGACCGTACTTTTGAGATTGGGATCCCAGTTGATGCTTGGTTGGGTGACGGTTGGTGGGAAGGGGTCATTACTGCAGTCAATGTTTGTGGAGTTGATACGCTGCAGGTTTATTCCCCTGGTGAAGGGAAGTTCCTTGTGCTTGAGAAGAAGAATATCAGGATTTCCCGAGACTGGGTTGGTGACAGGTGGGTTGATTTAACGGGGAAGCCTGACATTTGTAGCTTCTTATCTTCAAATGTTGCTTCCAGCATCCAGCCGTTACTTCAGTCCGCCGTGGCAGATGGATCTTTATCTGATTTTTCAACAACGACGGAGACTAAATTGTTGTCCATTCCCAAAACTGAGGTCCTAGACAAGGATGAGTCTCGATTATCTGGCTTCAGTGCATCGGATGACCAGGAAAATAGGGTGGTGGTCACGTTGGGAAAGCCTCTCGACGTCATTCATGAAGACCAAGATAATTACTCTCCTGATGCCAGTTTTGATGTCACTGACAAAGATGATACGAATGACAGCGATCAAGCCAGTGAGGACAAACTGAAGGTGGAGCAAATTTTGAGTCTGCAAAACTAA 1986 0.4295 MTMGNPVFVEWEEQIICQERGNRVTHFYLRDASGNSVLAVVGTERSIRHMMYVVSDEFLQAYGSRDIISGCKWRARREVVDWLTCLVSRNRHQHMDDLDALMNDSAQAVNSLEALTTGTSANKTYSSYKMVSRKLKIQSSDIEWSGTSWFCAKQLKHYSGFCRNGTTIYVHSFVYIMAEEEIQYLGYIEDMYEDKKGQKKVKVRWFHHGQEVKQVMPQLNLQPGEVFITSHVQVVSADCVNGPAIVLSPKHYEKCLLAASQASSADVHVCSRQFKNNKLKPFSLSKLRGYCNQSVLSCLSSPILSKRKVKHPKLHREDEEDPSRPSSKRNRSSKGYQILGKVSSTLQNAARKNQITECEPVFPMLKLKLSRKTMGIKVIGPKPKSHPSFKDDDRIEILCQDSGIRGCWFRCKMLHTSQKKLKVQYEDILDVDGKGKLEEWIPAYRVASPDKLGIRCTGRFTVRPHPPEDTADRTFEIGIPVDAWLGDGWWEGVITAVNVCGVDTLQVYSPGEGKFLVLEKKNIRISRDWVGDRWVDLTGKPDICSFLSSNVASSIQPLLQSAVADGSLSDFSTTTETKLLSIPKTEVLDKDESRLSGFSASDDQENRVVVTLGKPLDVIHEDQDNYSPDASFDVTDKDDTNDSDQASEDKLKVEQILSLQN 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2177g0001 661 Gene3D - 149 362 IPR043151 -
Prci2177g0001 661 MobiDBLite consensus disorder prediction 309 334 - -
Prci2177g0001 661 MobiDBLite consensus disorder prediction 620 651 - -
Prci2177g0001 661 SMART BAH_4 166 285 IPR001025 GO:0003682
Prci2177g0001 661 CDD Tudor_Agenet_AtDUF_rpt1_3 389 467 - -
Prci2177g0001 661 MobiDBLite consensus disorder prediction 620 661 - -
Prci2177g0001 661 Pfam Agenet domain 393 467 IPR008395 -
Prci2177g0001 661 Pfam BAH domain 167 279 IPR001025 GO:0003682
Prci2177g0001 661 ProSiteProfiles BAH domain profile. 166 285 IPR001025 GO:0003682
Prci2177g0001 661 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 258 599 - -
Prci2177g0001 661 SMART agenet_At_2 473 531 IPR014002 -
Prci2177g0001 661 MobiDBLite consensus disorder prediction 312 328 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2177g0001 401 529 PHD Transcription Factor Family AT5G58610 28.571 3.63e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2177g0001 - - gmx:100816046 825.469